BO25884.complete Sequence
895 bp assembled on 2010-06-29
GenBank Submission: KX798468
> BO25884.complete
GAAGTTATCAGTCGACATGGGAGAAGACAGTTCGAGGCGCCTCCCGCGCT
GGTGGTTTGGAGGGGTTTGCGCTGCAATCGCAGTCACCGGCACCCATCCG
ATTGATCTCATCAAGGTACAGCTGCAGACCCAATCCCAAGCGGACCGGAA
GACCGTGGGGGAGATCCTTAAAGGCATACACGAGCGGAGCGGAATCTTGG
GCTTTTACAATGGCATTTCGGCCTCCTGGTTTCGCCAGCTGACCTATACC
ACCACTCGCTTCGCCTTGTACGAGGCCGGTAAGGACTACGTCGACACGCA
AAAAGTTAGTTCCAAGATGGCCCTGGCCACCTTTGCGGGAATCGTCGGTG
GGATTGTGGGTGTACCCGGGGACGTGGTCACAGTGCGACTCCAGAACGAC
GTCAAGTTGCCGGAGGAGAAGCGACGTAACTACAAGCACGTTTTCGACGG
CCTTTTCCGCATCTACAAAGAGGAGGGCGTGTCCAGTCTCTTCCGCGGCA
CAGTGCCGGCCGTTTCCAGGGCAGTCCTGCTGACCATCGGAACGAATGCA
GCCTACGACCAAGTAAAGCAGATGCTCAAGATCGCAACGGGGGCAGGAGA
GGGAGTACCACTGCACTTTGCCACATCCACGATAGCTGGATGCATTGCCG
TGGTGATAACGCAGCCGCTCGATGTGATCAAGACGACTTTCATGAACGCC
CAGCCGGGGGAGTTCTCCGGGATCGGAGGTGCTTTTCTGAGTACCGCCAA
ACAGGGCCCATTGGCCTTCTACAAGGGATTCATTCCGGCCCTGATACGAG
TGTCACCCAATACGATTATCACCTTCGTTTTGTACGAGCAGGCGCGAATG
CGATTTGGATATCTGCCACCTGACAAGGCAAGCTTTCTAGACCAT
BO25884.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:27:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic3-RA | 864 | CG11196-PA | 1..861 | 17..877 | 4305 | 100 | Plus |
| Dic3-RB | 513 | CG11196-PB | 1..513 | 17..533 | 2490 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:27:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic3-RA | 1001 | CG11196-RA | 42..902 | 17..877 | 4305 | 100 | Plus |
| Dic3-RB | 997 | CG11196-RB | 42..898 | 17..877 | 4210 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:27:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7993897..7994344 | 877..430 | 2240 | 100 | Minus |
| 2R | 25286936 | 2R | 7994515..7994927 | 429..17 | 2065 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:27:44 has no hits.
BO25884.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:01 Download gff for
BO25884.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11196-RA | 42..902 | 17..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:10 Download gff for
BO25884.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic3-RA | 42..902 | 17..879 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:53 Download gff for
BO25884.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic3-RA | 42..902 | 17..879 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:53 Download gff for
BO25884.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7994515..7994927 | 17..429 | 100 | | Minus |
| 2R | 7993895..7994344 | 430..879 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:10 Download gff for
BO25884.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3881400..3881849 | 430..879 | 99 | <- | Minus |
| arm_2R | 3882020..3882432 | 17..429 | 100 | | Minus |
BO25884.pep Sequence
Translation from 16 to 895
> BO25884.pep
MGEDSSRRLPRWWFGGVCAAIAVTGTHPIDLIKVQLQTQSQADRKTVGEI
LKGIHERSGILGFYNGISASWFRQLTYTTTRFALYEAGKDYVDTQKVSSK
MALATFAGIVGGIVGVPGDVVTVRLQNDVKLPEEKRRNYKHVFDGLFRIY
KEEGVSSLFRGTVPAVSRAVLLTIGTNAAYDQVKQMLKIATGAGEGVPLH
FATSTIAGCIAVVITQPLDVIKTTFMNAQPGEFSGIGGAFLSTAKQGPLA
FYKGFIPALIRVSPNTIITFVLYEQARMRFGYLPPDKASFLDH
BO25884.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:22:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic3-PA | 287 | CG11196-PA | 1..287 | 1..287 | 1474 | 100 | Plus |
| Dic1-PC | 280 | CG8790-PC | 6..279 | 8..283 | 730 | 51.4 | Plus |
| Dic1-PA | 280 | CG8790-PA | 6..279 | 8..283 | 730 | 51.4 | Plus |
| Dic1-PB | 280 | CG8790-PB | 6..279 | 8..283 | 730 | 51.4 | Plus |
| Dic3-PB | 170 | CG11196-PB | 1..136 | 1..136 | 703 | 100 | Plus |
