BO25896.complete Sequence
679 bp assembled on 2010-06-29
GenBank Submission: KX799924
> BO25896.complete
GAAGTTATCAGTCGACATGACAAGTTTTCAAATTCGATTGATTTCGGACC
AAAATCTGGTCCTCGTGGACGCCCTACATCACGAGTCGGAGATTTTTGTA
CCCCAGATATACAACAATGACATCGTACTGTGGAACATCATACGAGATCG
TCGGTCGAATCCAAAAGTCGAATTTTGTGAAGAGCCTGTCCAGGGTCAAG
GCAATGGTCAGATCTGCCAGCGCCCACAGATCCAGCCTCGGATAACGACG
GCGACGGCAGGTCTGGCCCCCTGGGCGGCGTCCATCGATGGCAGTCCATT
TAGAAGAGTTGCGGAGGAAGGTTCCCGGTGTCCACTGTTTTCACTCAAGC
TCATCTCGAATGGCAGCGTAGTGCTCGTAGAATGTAATGTCCACGAATCG
GAGATCTTTCTACCGCAGATTTGCGGCCAGTACATAGCCATGAAACGCAT
CACCGGCCACGAACTTTTACTGCCATCCAAACCGAAGATCTCTGCCATCC
AACCAGCTAAGACCAATTGTTTACGCATTCAACCGACTCGCTTCTTTTCA
AAAACGACCAACTTGGATAATCAGGCAAAAAAACGAAGGAAGCGCAAAAG
TCAAGAGCAAACCAATCACTCTGGAGCTGGGGATCAACGAACGTTGAAGT
CCGTGAAACGAGCAAGCTTTCTAGACCAT
BO25896.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:27:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32117-RA | 648 | CG32117-PA | 1..645 | 17..661 | 3195 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:27:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32117-RA | 787 | CG32117-RA | 40..684 | 17..661 | 3195 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:27:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12903028..12903672 | 661..17 | 3195 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:27:25 has no hits.
BO25896.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:00 Download gff for
BO25896.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32117-RA | 40..684 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:06 Download gff for
BO25896.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32117-RA | 40..684 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:41:46 Download gff for
BO25896.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32117-RA | 40..684 | 17..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:41:46 Download gff for
BO25896.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12903026..12903672 | 17..663 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:06 Download gff for
BO25896.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12896126..12896772 | 17..663 | 99 | | Minus |
BO25896.pep Sequence
Translation from 16 to 679
> BO25896.pep
MTSFQIRLISDQNLVLVDALHHESEIFVPQIYNNDIVLWNIIRDRRSNPK
VEFCEEPVQGQGNGQICQRPQIQPRITTATAGLAPWAASIDGSPFRRVAE
EGSRCPLFSLKLISNGSVVLVECNVHESEIFLPQICGQYIAMKRITGHEL
LLPSKPKISAIQPAKTNCLRIQPTRFFSKTTNLDNQAKKRRKRKSQEQTN
HSGAGDQRTLKSVKRASFLDH
BO25896.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32117-PA | 215 | CG32117-PA | 1..215 | 1..215 | 1117 | 100 | Plus |