BO25915.complete Sequence
1120 bp assembled on 2010-06-29
GenBank Submission: KX794468
> BO25915.complete
GAAGTTATCAGTCGACATGTTCGGATTGGGACAACTTTTGGCGGTAGCCC
TTCTTCTCATTTTCTTGCCATCGGGCTTGAGAGGCGCAACGACACGAACA
CACTTGGACACGAAGGCCATCCGTCCGAGATTCAATGCGGATCCCGGCAG
GATTATCAATGGAACAGAGGCCTCTCTGGGCGCAACTAGGCATCAGGTGG
GCATTCGCAAGGCTCTCAACGATGGCTACTTCTTTGGAACCGGGCACCTT
TGCGGAGGATCTCTCATCCGGCCGGGATGGGTACTCACCGCCGCCCATTG
CTTTGTGGATCAGATTATTTACGACGGCACTTTCGTGCCCAAGGAGGAGT
TCATCGTGGTGATGGGTAACCTGGATCGCTACAATCGCACCAACACGCTA
ACATTCACGATCGAAGAGCGCATAATGCAGCTGGATAAGTTCGACCTTTC
CACCTACGACAAGGACATCGCCCTGCTGATGCTGAATGGTACTGTACCCA
CTGGACATCCGACCATTCGTCCAATTGCCCTCAATCGGTTTGCCATACCG
GAGGGCGTCGTCTGCCAGGTGACGGGCTGGGGCAATACGGAGGATGGCTA
TGTCTCCGACATCCTGATGACCGTCGATGTGCCGATGATCAGCGAGGAGC
ATTGCATCAATGACAGCGACCTGGGCCACCTGATTCAGCCGGGAATGATA
TGTGCCGGTTATTTGGAGGTGGGAGAAAAGGATGCCTGCGCCGGCGATTC
CGGCGGACCATTGGTGTGCCAAAGTGAATTGGCCGGCGTGGTTTCCTGGG
GCATTCAATGTGCCCTGCCCAGATTACCGGGTGTGTACACAGAGGTGTCC
TACTACTACGACTGGATACTACAGAATATGGGCGAGAATGGTGAAGGAAG
TGGTGAAGAAAGTGGTGAGGGAAGTGGTGAGGGAAGTGGTGAGGGAAGTG
GTGAAGGAAGTGGTGAAGGTAGTGGTGATGACGGAAGTGGTGACGACGAA
GATGGAAGTGGTGATGGTGGTGGTGCCATGGCCGCCGTGGCCGGAAGTCT
GACTCTTCTTCTGCCCGGAATACTCGCTCTGAGACTAATGGCTACGCAGT
TCGCAAGCTTTCTAGACCAT
BO25915.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:39:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6048-RA | 1089 | CG6048-PA | 1..1086 | 17..1102 | 5430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:39:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6048-RA | 1158 | CG6048-RA | 34..1119 | 17..1102 | 5430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:39:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5953215..5954007 | 310..1102 | 3965 | 100 | Plus |
| X | 23542271 | X | 5952730..5952957 | 82..309 | 1140 | 100 | Plus |
| X | 23542271 | X | 5952598..5952665 | 17..84 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:39:07 has no hits.
BO25915.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:46:41 Download gff for
BO25915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6048-RA | 6..1086 | 22..1104 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:35 Download gff for
BO25915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6048-RA | 39..1119 | 22..1104 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:24 Download gff for
BO25915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6048-RA | 39..1119 | 22..1104 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:24 Download gff for
BO25915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5952603..5952664 | 22..83 | 100 | -> | Plus |
| X | 5952732..5952957 | 84..309 | 100 | -> | Plus |
| X | 5953215..5954007 | 310..1104 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:35 Download gff for
BO25915.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5846636..5846697 | 22..83 | 100 | -> | Plus |
| arm_X | 5846765..5846990 | 84..309 | 100 | -> | Plus |
| arm_X | 5847248..5848040 | 310..1104 | 99 | | Plus |
BO25915.pep Sequence
Translation from 16 to 1120
> BO25915.pep
MFGLGQLLAVALLLIFLPSGLRGATTRTHLDTKAIRPRFNADPGRIINGT
EASLGATRHQVGIRKALNDGYFFGTGHLCGGSLIRPGWVLTAAHCFVDQI
IYDGTFVPKEEFIVVMGNLDRYNRTNTLTFTIEERIMQLDKFDLSTYDKD
IALLMLNGTVPTGHPTIRPIALNRFAIPEGVVCQVTGWGNTEDGYVSDIL
MTVDVPMISEEHCINDSDLGHLIQPGMICAGYLEVGEKDACAGDSGGPLV
CQSELAGVVSWGIQCALPRLPGVYTEVSYYYDWILQNMGENGEGSGEESG
EGSGEGSGEGSGEGSGEGSGDDGSGDDEDGSGDGGGAMAAVAGSLTLLLP
GILALRLMATQFASFLDH
BO25915.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6048-PA | 362 | CG6048-PA | 1..362 | 1..362 | 1914 | 100 | Plus |
| CG14780-PA | 302 | CG14780-PA | 32..270 | 45..284 | 459 | 43.3 | Plus |
| CG6041-PA | 308 | CG6041-PA | 7..271 | 7..286 | 426 | 36.2 | Plus |
| CG32755-PA | 315 | CG32755-PA | 37..271 | 45..284 | 394 | 37.1 | Plus |
| zetaTry-PA | 280 | CG12387-PA | 9..273 | 7..284 | 381 | 35.3 | Plus |
