BO25916.complete Sequence
1654 bp assembled on 2010-06-29
> BO25916.complete
GAAGTTATCAGTCGACATGAGAACAATGTCAACGCGGATTTTGAGCCACA
GCGCAGTCCGACTTTCATTACTGGCAATGGCAATCCTGGCGAGCGTTGGA
CAAGCGACCGACCGATCCGAAGGAAGATCAGTACGCAGGTACTCATATGC
GGATACCTCGTGGCCCAGGCGGCCGTTCGGCAGCGAGCGAAGGGACTTGG
CGCCGTCGGAGCAGCGATACTTCTCCGATCCGGAACTGCTCTTCCAGCGG
CTGGACGACATGGAGCAGAAATTGGGAATTCCAGAAAAAATGGCTGCTGC
TGGCAAGGTGAAATCGGAACACTATCTGGTTGGTCCCACGAATGTTGCCG
CCCAGATGCTCAAAGATAACTTGTACAAATTTCCGATTGATGACGGCGCC
ATTGGACAGGGAATGCACGATGATTGTCTGGGTAAGGAGGATGTGGATGA
TCCCTTCGAGTCCCTGGCCAGGATGAACTTCAATGAGCATTTGAATGAGC
GTAAGTCCGATCGTGAGCTCAAGAGGGTGCTGGGTGGCTACTTAAACGAC
CAGCAGCTGGATGGAAAACCAGCTGTGGCAACAGCCAATTTGCTGGCCAA
GGTCATTAGCTCCAAGGTCGATCAGCCCAGGAAGTCTGGGCCTTGTCGTG
GCACCACGGCTCGATCCCACGGGTTCACCACAAGAAGCCCTACGACTCAT
CGGACGACCCTTAGTACCACAACGCGCAGTCCCACCACTTTCTGCCTTCC
GGAACCCTCATCCGATCCTCCGCTCAAGCCGCTTCCCACATCTCCACCAA
CACCTCGTCCTCCGCCTTCCGCACCTTCGCGTCCACCAACGACGCGAAAG
CCATCTGCTCAAAGGATTAAGCCCAGTAATAAGTGCCCCATATCGACGAA
ATCTCAAAAGCTAGGAGGTGCCAAGGTGCTGCTGGAAATCATTTTGGCCA
CCAAGCAGCATGCCCTATCGGTGCTCAAGAATCTCAACTACCTGGAATTG
GAACTGCTAAGTCACTCAACGGACGACGATGTATCGGAGAACCACGTTAA
AGAGAAAGAACCAACAACAAAGACGTCTGAACGTATCGAAAAACCCGAGC
CAAGGCCACCATCCAGGGTATTTTCCTTTGGAATTCGACCAGCGAGCCAA
AAAGAGAGCTTGTACGACTTGGCAGTGGCCAAGGAGGAGGAGTTGAAACT
GCAGGATCGGGTGTGGGAGGAGCACCAGCAGCAGATGAAGCTAAGGAGGC
CAATGAAGCCAAAGAGGTTTGAGGTTGCTCCGGCGGCTGCTGCACGCCTG
GAACCTTTTCAGGAGCCTCGAAAGCCACTGAAGTCCATAAATTCCATGGA
GCCTTTTACTCCTTTGGAACCAGAAACCTCCGACGACAACAGACGTATCA
ATCTGGAAGCCTTGAGCGTGGTAGTCAAGCCAATGTCCTCCTTTCCCAGA
AAGGATTCTCTTAGCTCGTCGCCGCGAGCACAAATGAATGCTGTTCAATT
GGAGGGCACAAGCGATGATGAACTGCATCCAGGCAATACATTTGAATTGA
GACCAAGAAAGAAGAAAAAACACAAGTTGTACGCTATGGAAAAGCAGACA
CAGACTAAAAAGCTACCCATTGCAGGAGTTTTTTATGCAAGCTTTCTAGA
CCAT
BO25916.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:38:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13871-RA | 1563 | CG13871-PA | 1..1560 | 77..1636 | 7785 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:39:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13871-RA | 1717 | CG13871-RA | 26..1645 | 17..1636 | 8085 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:38:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 20317348..20318967 | 17..1636 | 8085 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:38:57 has no hits.
BO25916.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:46:39 Download gff for
BO25916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13871-RA | 1..1560 | 77..1638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:31 Download gff for
BO25916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13871-RA | 26..1645 | 17..1638 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:21 Download gff for
BO25916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13871-RA | 26..1645 | 17..1638 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:21 Download gff for
BO25916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 20317348..20318967 | 17..1638 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:31 Download gff for
BO25916.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16204853..16206472 | 17..1638 | 99 | | Plus |
BO25916.pep Sequence
Translation from 16 to 1654
> BO25916.pep
MRTMSTRILSHSAVRLSLLAMAILASVGQATDRSEGRSVRRYSYADTSWP
RRPFGSERRDLAPSEQRYFSDPELLFQRLDDMEQKLGIPEKMAAAGKVKS
EHYLVGPTNVAAQMLKDNLYKFPIDDGAIGQGMHDDCLGKEDVDDPFESL
ARMNFNEHLNERKSDRELKRVLGGYLNDQQLDGKPAVATANLLAKVISSK
VDQPRKSGPCRGTTARSHGFTTRSPTTHRTTLSTTTRSPTTFCLPEPSSD
PPLKPLPTSPPTPRPPPSAPSRPPTTRKPSAQRIKPSNKCPISTKSQKLG
GAKVLLEIILATKQHALSVLKNLNYLELELLSHSTDDDVSENHVKEKEPT
TKTSERIEKPEPRPPSRVFSFGIRPASQKESLYDLAVAKEEELKLQDRVW
EEHQQQMKLRRPMKPKRFEVAPAAAARLEPFQEPRKPLKSINSMEPFTPL
EPETSDDNRRINLEALSVVVKPMSSFPRKDSLSSSPRAQMNAVQLEGTSD
DELHPGNTFELRPRKKKKHKLYAMEKQTQTKKLPIAGVFYASFLDH
BO25916.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:20:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13871-PA | 520 | CG13871-PA | 1..520 | 21..540 | 2700 | 100 | Plus |