Clone BO25916 Report

Search the DGRC for BO25916

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:259
Well:16
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO25916.pep: Imported from assembly
Sequenced Size:1654

Clone Sequence Records

BO25916.complete Sequence

1654 bp assembled on 2010-06-29

> BO25916.complete
GAAGTTATCAGTCGACATGAGAACAATGTCAACGCGGATTTTGAGCCACA
GCGCAGTCCGACTTTCATTACTGGCAATGGCAATCCTGGCGAGCGTTGGA
CAAGCGACCGACCGATCCGAAGGAAGATCAGTACGCAGGTACTCATATGC
GGATACCTCGTGGCCCAGGCGGCCGTTCGGCAGCGAGCGAAGGGACTTGG
CGCCGTCGGAGCAGCGATACTTCTCCGATCCGGAACTGCTCTTCCAGCGG
CTGGACGACATGGAGCAGAAATTGGGAATTCCAGAAAAAATGGCTGCTGC
TGGCAAGGTGAAATCGGAACACTATCTGGTTGGTCCCACGAATGTTGCCG
CCCAGATGCTCAAAGATAACTTGTACAAATTTCCGATTGATGACGGCGCC
ATTGGACAGGGAATGCACGATGATTGTCTGGGTAAGGAGGATGTGGATGA
TCCCTTCGAGTCCCTGGCCAGGATGAACTTCAATGAGCATTTGAATGAGC
GTAAGTCCGATCGTGAGCTCAAGAGGGTGCTGGGTGGCTACTTAAACGAC
CAGCAGCTGGATGGAAAACCAGCTGTGGCAACAGCCAATTTGCTGGCCAA
GGTCATTAGCTCCAAGGTCGATCAGCCCAGGAAGTCTGGGCCTTGTCGTG
GCACCACGGCTCGATCCCACGGGTTCACCACAAGAAGCCCTACGACTCAT
CGGACGACCCTTAGTACCACAACGCGCAGTCCCACCACTTTCTGCCTTCC
GGAACCCTCATCCGATCCTCCGCTCAAGCCGCTTCCCACATCTCCACCAA
CACCTCGTCCTCCGCCTTCCGCACCTTCGCGTCCACCAACGACGCGAAAG
CCATCTGCTCAAAGGATTAAGCCCAGTAATAAGTGCCCCATATCGACGAA
ATCTCAAAAGCTAGGAGGTGCCAAGGTGCTGCTGGAAATCATTTTGGCCA
CCAAGCAGCATGCCCTATCGGTGCTCAAGAATCTCAACTACCTGGAATTG
GAACTGCTAAGTCACTCAACGGACGACGATGTATCGGAGAACCACGTTAA
AGAGAAAGAACCAACAACAAAGACGTCTGAACGTATCGAAAAACCCGAGC
CAAGGCCACCATCCAGGGTATTTTCCTTTGGAATTCGACCAGCGAGCCAA
AAAGAGAGCTTGTACGACTTGGCAGTGGCCAAGGAGGAGGAGTTGAAACT
GCAGGATCGGGTGTGGGAGGAGCACCAGCAGCAGATGAAGCTAAGGAGGC
CAATGAAGCCAAAGAGGTTTGAGGTTGCTCCGGCGGCTGCTGCACGCCTG
GAACCTTTTCAGGAGCCTCGAAAGCCACTGAAGTCCATAAATTCCATGGA
GCCTTTTACTCCTTTGGAACCAGAAACCTCCGACGACAACAGACGTATCA
ATCTGGAAGCCTTGAGCGTGGTAGTCAAGCCAATGTCCTCCTTTCCCAGA
AAGGATTCTCTTAGCTCGTCGCCGCGAGCACAAATGAATGCTGTTCAATT
GGAGGGCACAAGCGATGATGAACTGCATCCAGGCAATACATTTGAATTGA
GACCAAGAAAGAAGAAAAAACACAAGTTGTACGCTATGGAAAAGCAGACA
CAGACTAAAAAGCTACCCATTGCAGGAGTTTTTTATGCAAGCTTTCTAGA
CCAT

BO25916.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:38:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG13871-RA 1563 CG13871-PA 1..1560 77..1636 7785 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:39:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG13871-RA 1717 CG13871-RA 26..1645 17..1636 8085 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:38:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20317348..20318967 17..1636 8085 99.9 Plus
Blast to na_te.dros performed on 2014-11-26 14:38:57 has no hits.

BO25916.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:46:39 Download gff for BO25916.complete
Subject Subject Range Query Range Percent Splice Strand
CG13871-RA 1..1560 77..1638 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:31 Download gff for BO25916.complete
Subject Subject Range Query Range Percent Splice Strand
CG13871-RA 26..1645 17..1638 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:21 Download gff for BO25916.complete
Subject Subject Range Query Range Percent Splice Strand
CG13871-RA 26..1645 17..1638 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:21 Download gff for BO25916.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20317348..20318967 17..1638 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:31 Download gff for BO25916.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16204853..16206472 17..1638 99   Plus

BO25916.pep Sequence

Translation from 16 to 1654

> BO25916.pep
MRTMSTRILSHSAVRLSLLAMAILASVGQATDRSEGRSVRRYSYADTSWP
RRPFGSERRDLAPSEQRYFSDPELLFQRLDDMEQKLGIPEKMAAAGKVKS
EHYLVGPTNVAAQMLKDNLYKFPIDDGAIGQGMHDDCLGKEDVDDPFESL
ARMNFNEHLNERKSDRELKRVLGGYLNDQQLDGKPAVATANLLAKVISSK
VDQPRKSGPCRGTTARSHGFTTRSPTTHRTTLSTTTRSPTTFCLPEPSSD
PPLKPLPTSPPTPRPPPSAPSRPPTTRKPSAQRIKPSNKCPISTKSQKLG
GAKVLLEIILATKQHALSVLKNLNYLELELLSHSTDDDVSENHVKEKEPT
TKTSERIEKPEPRPPSRVFSFGIRPASQKESLYDLAVAKEEELKLQDRVW
EEHQQQMKLRRPMKPKRFEVAPAAAARLEPFQEPRKPLKSINSMEPFTPL
EPETSDDNRRINLEALSVVVKPMSSFPRKDSLSSSPRAQMNAVQLEGTSD
DELHPGNTFELRPRKKKKHKLYAMEKQTQTKKLPIAGVFYASFLDH

BO25916.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:20:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG13871-PA 520 CG13871-PA 1..520 21..540 2700 100 Plus