BO25921.complete Sequence
475 bp assembled on 2010-06-29
> BO25921.complete
GAAGTTATCAGTCGACATGAAGTGGCTTGTGTTATTTGTAATAACCCTTG
GCTTAGGATTAGCCACACCCAATTCGACCTACAATCATTATCGCCTGCCG
ACGGCACTTCGACCTATCAAGTATGACCTGCACGTGCTAACCCAGCTGGA
ATATGCTGATGATTTTAGTTTTAACGGAAGTGTGAAAATCCAAATCCAAG
TCTTGGAAAACACCAACAACATAACTTTGCATTCGAAGGAACTGACGATC
GATGAGACGGCAACCACTCTTCGCCAAATTACCGGAGAGGATCTAAAGAA
TAACTGCGTGTCCTCCACAGAGACCGATTGCGGGGATACTACCGCAGCTC
CTACGTGGATCCTGTGGCCAATGAGACCAGGTGTGGACTGGCGATTACTC
GAAGAAGAAAACAGATATTTAATCCTTGTATGTTCACCGGACTTAGCAAT
ATGCCCGGCAAGCTTTCTAGACCAT
BO25921.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:38:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31427-RF | 876 | CG31427-PF | 1..306 | 17..322 | 1530 | 100 | Plus |
CG31427-RE | 750 | CG31427-PE | 1..306 | 17..322 | 1530 | 100 | Plus |
CG31427-RD | 750 | CG31427-PD | 1..306 | 17..322 | 1530 | 100 | Plus |
CG31427-RF | 876 | CG31427-PF | 405..541 | 321..457 | 685 | 100 | Plus |
CG31427-RE | 750 | CG31427-PE | 405..541 | 321..457 | 685 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:38:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31427-RF | 1127 | CG31427-RF | 101..406 | 17..322 | 1530 | 100 | Plus |
CG31427-RE | 1076 | CG31427-RE | 101..406 | 17..322 | 1530 | 100 | Plus |
CG31427-RD | 1152 | CG31427-RD | 71..376 | 17..322 | 1530 | 100 | Plus |
CG31427-RF | 1127 | CG31427-RF | 505..641 | 321..457 | 685 | 100 | Plus |
CG31427-RE | 1076 | CG31427-RE | 505..641 | 321..457 | 685 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:38:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 29239662..29239967 | 322..17 | 1530 | 100 | Minus |
3R | 32079331 | 3R | 29239427..29239563 | 457..321 | 685 | 100 | Minus |
3R | 32079331 | 3R | 29237857..29237998 | 288..147 | 290 | 80.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:38:35 has no hits.
BO25921.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:46:30 Download gff for
BO25921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31427-RB | 101..541 | 17..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:22 Download gff for
BO25921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31427-RD | 71..376 | 17..322 | 100 | -> | Plus |
CG31427-RD | 477..611 | 323..459 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:13 Download gff for
BO25921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31427-RD | 71..376 | 17..322 | 100 | -> | Plus |
CG31427-RD | 477..611 | 323..459 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:13 Download gff for
BO25921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 29239424..29239561 | 323..459 | 98 | <- | Minus |
3R | 29239662..29239967 | 17..322 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:22 Download gff for
BO25921.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 25065146..25065283 | 323..459 | 98 | <- | Minus |
arm_3R | 25065384..25065689 | 17..322 | 100 | | Minus |
BO25921.pep Sequence
Translation from 16 to 475
> BO25921.pep
MKWLVLFVITLGLGLATPNSTYNHYRLPTALRPIKYDLHVLTQLEYADDF
SFNGSVKIQIQVLENTNNITLHSKELTIDETATTLRQITGEDLKNNCVSS
TETDCGDTTAAPTWILWPMRPGVDWRLLEEENRYLILVCSPDLAICPASF
LDH
BO25921.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:20:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31427-PE | 249 | CG31427-PE | 1..104 | 1..104 | 526 | 98.1 | Plus |
CG31427-PD | 249 | CG31427-PD | 1..104 | 1..104 | 526 | 98.1 | Plus |
CG31427-PC | 249 | CG31427-PC | 1..104 | 1..104 | 526 | 98.1 | Plus |
CG31427-PF | 291 | CG31427-PF | 1..104 | 1..104 | 526 | 98.1 | Plus |
CG11951-PB | 493 | CG11951-PB | 1..101 | 1..101 | 328 | 62.4 | Plus |