Clone BO25922 Report

Search the DGRC for BO25922

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:259
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG13725-RA
Protein status:BO25922.pep: Imported from assembly
Sequenced Size:631

Clone Sequence Records

BO25922.complete Sequence

631 bp assembled on 2010-06-29

GenBank Submission: KX794647

> BO25922.complete
GAAGTTATCAGTCGACATGGCTAAGATTCCTTTAAGCTGGAGCAGAGTTC
TTCGGCTGATTCGGTTGCATCATCTGGCGGTGGGCAACATCGCCGTGCTC
TGCCTTATTGTGTTGAGTATCATGGACTACGGGATATTAGATCTCTTCTG
TTGGTTTGAAACGGTTGAGGAGGAGAATATTCCGCTGACCGTTTTGATGT
ACATCGGTGGATTAAAGGTGGCTATTATCCTGTTTCTCGCACTGTGGTGC
TGGACTAGAGAAGAAGCTGAAAAGAATCAGGAGGGCAATATGGACATGCC
CATCTCTTACGTTCGTAAGCGGTACTGTCGTTTTCTTGTGATGAACCTGT
TGGCGTCCGTAGACCGGCTGATCCACCACCACTCACACATTGATGACTTC
CTGCAAAGTCGCAAGGACTGCGGCGAGGCAGTGGAACAGTTTCGCTGGAG
AGCTCGAAGGCTCTTTGAGCGCACGGATCTGCAACTTTGTGTTCCACTCC
ACGAAGTCCTTTCTGTGGATGATCCGCAGGAGAAGGAACTCCTCCGCTTG
GGTTACGGCGATAAATTGGCACAGTTGCGAGAGCTGGACGTCTACAAGAT
GATCTACAGCGACGCAAGCTTTCTAGACCAT

BO25922.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG13725-RA 600 CG13725-PA 1..597 17..613 2985 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG13725-RA 901 CG13725-RA 95..691 17..613 2985 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17324828..17325424 613..17 2985 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:30:48 has no hits.

BO25922.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:11 Download gff for BO25922.complete
Subject Subject Range Query Range Percent Splice Strand
CG13725-RA 33..629 17..615 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:43 Download gff for BO25922.complete
Subject Subject Range Query Range Percent Splice Strand
CG13725-RA 95..691 17..615 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:43:02 Download gff for BO25922.complete
Subject Subject Range Query Range Percent Splice Strand
CG13725-RA 95..691 17..615 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:43:02 Download gff for BO25922.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17324826..17325424 17..615 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:43 Download gff for BO25922.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17317926..17318524 17..615 99   Minus

BO25922.pep Sequence

Translation from 16 to 631

> BO25922.pep
MAKIPLSWSRVLRLIRLHHLAVGNIAVLCLIVLSIMDYGILDLFCWFETV
EEENIPLTVLMYIGGLKVAIILFLALWCWTREEAEKNQEGNMDMPISYVR
KRYCRFLVMNLLASVDRLIHHHSHIDDFLQSRKDCGEAVEQFRWRARRLF
ERTDLQLCVPLHEVLSVDDPQEKELLRLGYGDKLAQLRELDVYKMIYSDA
SFLDH

BO25922.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:22:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG13725-PA 199 CG13725-PA 1..199 1..199 1047 100 Plus