BO25924.complete Sequence
934 bp assembled on 2010-06-29
GenBank Submission: KX795316
> BO25924.complete
GAAGTTATCAGTCGACATGATCAGCCCGGTAATAACTCGACAAATGGTGC
AAATCCTGCCAAGTGTTATGGTCGGTAGGATAACACTTCCCGATATTATT
GAGGATGCAATCAAGCCCCCAACGGAAGATATTAATTTCGAAGAAAAATC
GAATGAGAATGAGGTGGAAGATAATACAGAGAAATCGGAAGCGGTTTCTG
AATCCGAAAAAGAGGTAATTGAGGTATCTGAGGAGCCGAAGGAAGAAGAG
GTAAAGTACGCTTGGAATGCACCCTGCATGATGGTCATCTTCGAGGATGG
CGATGTCAATTGTGCCCTGCATCACCTGGTCGAATCTCTACAGGATCCCT
TTGCCTTAGATGCGGTTGCCGTGATCTTGGTACAAGAAGCTTTAGCCGAA
GAAATCGAAAACCGAGTAAAAATTCTGATGAAACCCTTGGATGCCAGGGT
GGCCAATCATCCGTGCTACAAGCGCACTCTGATGAAGATTGACGAACTTA
GGCCGAAAACTATAATAGGTCCTTCAGATCGTGTCTTACCCGATGCCACG
CCCATAATGGTGCGGGACATACCACACAAATTTCTGGGCGATGGACCCAC
TGGCATTATAACCATGCATATTTTTCGCACCCCTTTCGAAGCCACTCAGA
TATATAGAAAGGAATATCCCCTACCAATCGCATCGGTTAGTATATGGAAT
GAGCGGGTTTCGAGTGTTTACGATGTAATTGGCATGATGAATCTACTCGA
TACCTTTAAGATCAACTGTTTCACGGTCGATATGGAGCCCATTAAGCGGG
CATTCGAGCTAAGGAAGTATAGTGCTTGTATACATCGTGGTTATCACTAT
GAAACCCTGCCCATAAATGGCGAGAGAAAGATTATCATATATCCAGTTGG
AACTATATTTGGCAATGCAAGCTTTCTAGACCAT
BO25924.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:30:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12516-RB | 903 | CG12516-PB | 1..900 | 17..916 | 4500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12516-RB | 975 | CG12516-RB | 39..938 | 17..916 | 4500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 28303668..28304567 | 916..17 | 4500 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:30:39 has no hits.
BO25924.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:10 Download gff for
BO25924.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12516-RA | 1..873 | 44..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:40 Download gff for
BO25924.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12516-RB | 39..938 | 17..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:42:58 Download gff for
BO25924.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12516-RB | 39..938 | 17..918 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:42:58 Download gff for
BO25924.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 28303665..28304567 | 17..918 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:40 Download gff for
BO25924.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 24129387..24130289 | 17..918 | 99 | | Minus |
BO25924.pep Sequence
Translation from 16 to 934
> BO25924.pep
MISPVITRQMVQILPSVMVGRITLPDIIEDAIKPPTEDINFEEKSNENEV
EDNTEKSEAVSESEKEVIEVSEEPKEEEVKYAWNAPCMMVIFEDGDVNCA
LHHLVESLQDPFALDAVAVILVQEALAEEIENRVKILMKPLDARVANHPC
YKRTLMKIDELRPKTIIGPSDRVLPDATPIMVRDIPHKFLGDGPTGIITM
HIFRTPFEATQIYRKEYPLPIASVSIWNERVSSVYDVIGMMNLLDTFKIN
CFTVDMEPIKRAFELRKYSACIHRGYHYETLPINGERKIIIYPVGTIFGN
ASFLDH
BO25924.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:22:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12516-PB | 300 | CG12516-PB | 1..300 | 1..300 | 1558 | 100 | Plus |
CG2336-PA | 322 | CG2336-PA | 45..311 | 30..298 | 559 | 41.3 | Plus |
CG15717-PE | 252 | CG15717-PE | 22..252 | 73..300 | 500 | 41.3 | Plus |
CG15717-PC | 252 | CG15717-PC | 22..252 | 73..300 | 500 | 41.3 | Plus |
CG15717-PA | 252 | CG15717-PA | 22..252 | 73..300 | 500 | 41.3 | Plus |