BO25928.complete Sequence
1075 bp assembled on 2010-06-29
GenBank Submission: KX796722
> BO25928.complete
GAAGTTATCAGTCGACATGACGGGTTCGTTCAGTGTGAAGCTCAAGTCCA
AAAAAGGTCAATTCATTGTCAACGACCTGAACGAGCATACGACGCTGGGG
GAGCTGAAAACGAAAATAGTCCAGGCCACCGACATCGAAGCGACGCAATT
GCACGTCCTAGTAGGCTATCCGCCCAAGCCATTGGATCTCTCGCAGCAGC
AGGAGCAGCGCGCCCTCAAGGCGGTCGGAATCAACAGCGGAGAGACGTTG
ATTGTGGAGGAGAAGGCTGCCCCTGCTCCTGCTGCCCCTGTGCCTGGCGG
CACCACCGTGGAGGATGACGAGGCGCTGGCGCGTCGTCTGCAGGCCGAGG
AGGAGGCACAGCTGCTGCAGGAAACCGCTGGCGGTCCAGTCGCCCAGGCA
GCAGACTACCAGCTGCCAGTGGCGCCGACGGAAAGCGGACCGAATGGCGA
CTTTAATGGCATACTGCTGAAGAAGGTGGTGCCGGCGGACAATTCGTGCC
TCTTCACCAGCATACGATTCGTGCTCAACGGGAAGGTGGACAACGAGGGC
AGCGAAATGATGCGTCACATCATTGCGCAGGAGGTGGCCGCCGATCCGCA
GAGCTACAACGACGCCGTGCTGGGCAAATCGAATGCCGAGTACTGCGCCT
GGATACAGAAGGCGGATTCGTGGGGCGGCGCCATCGAAGTGTCCATACTG
TCCAACTACTATGGCATTGAGATCGATGTGGTGGACATACAAAACGCCAT
TATCAATCGCTTTGGCGAGGACAAGAACTTTGGACTGCGTGTCTTCCTGC
TCTTCGATGGCATCCACTACGATCCGCTGTACATGGAGACATCGCCGAGT
GCTGCGCCGGCCACCATCTTCCCGGTGGAAGAGCTGGGCGTCTATCAGCA
GGCCGAGCAGTTGGCCAACGAGGCGCAGTCCTCCCGCCAATACACCAATG
TGGATAAATTCACGCTGCGCTGCATGCAGTGCGATGTCAGGCTGGTCGGC
CAGGTGCAGGCCCAGGAGCATGCCAAGCAAACCGGACACAAGAACTTTGG
AGAGATTGCAAGCTTTCTAGACCAT
BO25928.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:37:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4603-RC | 1044 | CG4603-PC | 1..1041 | 17..1057 | 5190 | 99.9 | Plus |
| CG4603-RB | 1116 | CG4603-PB | 1..1041 | 17..1057 | 5190 | 99.9 | Plus |
| CG4603-RA | 1044 | CG4603-PA | 1..1041 | 17..1057 | 5190 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:37:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4603-RC | 1394 | CG4603-RC | 115..1155 | 17..1057 | 5190 | 99.9 | Plus |
| CG4603-RB | 1451 | CG4603-RB | 172..1212 | 17..1057 | 5190 | 99.9 | Plus |
| CG4603-RA | 1451 | CG4603-RA | 172..1212 | 17..1057 | 5190 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:37:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 5134391..5135431 | 17..1057 | 5190 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:37:55 has no hits.
BO25928.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:46:23 Download gff for
BO25928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4603-RA | 181..1221 | 17..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:39:04 Download gff for
BO25928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4603-RA | 172..1212 | 17..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:57:00 Download gff for
BO25928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4603-RA | 172..1212 | 17..1059 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:57:00 Download gff for
BO25928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 5134391..5135431 | 17..1059 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:39:04 Download gff for
BO25928.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 5127491..5128531 | 17..1059 | 99 | | Plus |
BO25928.pep Sequence
Translation from 16 to 1075
> BO25928.pep
MTGSFSVKLKSKKGQFIVNDLNEHTTLGELKTKIVQATDIEATQLHVLVG
YPPKPLDLSQQQEQRALKAVGINSGETLIVEEKAAPAPAAPVPGGTTVED
DEALARRLQAEEEAQLLQETAGGPVAQAADYQLPVAPTESGPNGDFNGIL
LKKVVPADNSCLFTSIRFVLNGKVDNEGSEMMRHIIAQEVAADPQSYNDA
VLGKSNAEYCAWIQKADSWGGAIEVSILSNYYGIEIDVVDIQNAIINRFG
EDKNFGLRVFLLFDGIHYDPLYMETSPSAAPATIFPVEELGVYQQAEQLA
NEAQSSRQYTNVDKFTLRCMQCDVRLVGQVQAQEHAKQTGHKNFGEIASF
LDH
BO25928.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:20:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4603-PC | 347 | CG4603-PC | 1..347 | 1..347 | 1779 | 100 | Plus |
| CG4603-PA | 347 | CG4603-PA | 1..347 | 1..347 | 1779 | 100 | Plus |
| CG4603-PB | 371 | CG4603-PB | 1..347 | 1..347 | 1779 | 100 | Plus |
