BO25932.complete Sequence
1147 bp assembled on 2010-06-29
GenBank Submission: KX794595
> BO25932.complete
GAAGTTATCAGTCGACATGGGTCATAAAATGGGTGGCTTCTTGGAAAAAC
CAGAAACTGAAAAGCAGGCTCAAGAGGGTCATGGGAATGGGCTGCGATAC
TGCGTAAGTTCTATGCAAGGTTGGCGATTGGAAATGGAGGATAGCCACTC
GGCTGCTTGCCGGCTGAAGGATCCCTTCGCAACGTGGTCATATTTTGCGG
TGTTCGATGGTCACGCTGGCAGTCAAATATCACTGCATTGCGCTGAACAT
CTAATGAGTACTATATTGGAATCCGAATCTTTTTCGAAGCACAAATACGA
GGCTGGCATACGAGAGGGCTTCCTGCAGTTGGATGAGGATATGAGGAAGC
TGTATCACGACCAGCAAGGCGGCTCGACGGCCATTTGTGTTTTTGTATCA
CCGGACAAAATATATCTGGTCAATTGTGGTGACTCGCGTGCAGTGATATC
GCGAAATGGAGCAGCTGTCATCAGTACAATTGATCACAAGCCGTTTTCTC
CCAAAGAACAAGAACGCATTCAAAATGCCGGAGGCAGTGTAATGATTAAA
AGGATAAATGGCACTCTGGCAGTTTCCCGGGCCTTCGGTGACTATGATTT
CAAGAATGATGGCTCAAAGTCTCCTGTCGATCAGATGGTGTCTCCGGAAC
CTGATATAATAGTTTGCAATCGGTCCGAACACGATGAATTCATAGTTGTA
GCCTGCGATGGCATTTGGGATGTGATGACTAGCAGCGAGGTTTGTGAATT
TATTAGGTCACGGCTTTTGGTGACCTATGACCTGCCGATGATTGTTAACA
GCGTATTGGATATTTGCCTGCATAAAGGCAGCAGGGACAATATGACACTG
CTCCTCCTACTTTTGCCTGGAGCACCAAAGGTCGATATGGATGCAGTTAA
GGCCGAAAGGAGTCTTGATCAAACTATTGTGCAAATAACCAAGGAAGTGA
TTGAGAAGCACGAAATACACGACTTTGAAACACTTATACGACTGATGAAA
AGAATGGCCATTAACATTCCAAATCTACCACCTGGCGGTGGTCTTTATGC
AAAATATTACATTATAGAGCAAGCTTTCCACGAGAAATTTCCAGATACTC
CGGCTGAAATATATGATTATTTTTCCATGGCAAGCTTTCTAGACCAT
BO25932.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:37:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6036-RA | 1116 | CG6036-PA | 1..1113 | 17..1129 | 5565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:37:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6036-RA | 1184 | CG6036-RA | 28..1140 | 17..1129 | 5565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26344334..26345446 | 1129..17 | 5565 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:37:12 has no hits.
BO25932.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:46:19 Download gff for
BO25932.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6036-RA | 20..1132 | 17..1131 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:47 Download gff for
BO25932.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6036-RA | 28..1140 | 17..1131 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:44 Download gff for
BO25932.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6036-RA | 28..1140 | 17..1131 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:44 Download gff for
BO25932.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26344332..26345446 | 17..1131 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:47 Download gff for
BO25932.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22170054..22171168 | 17..1131 | 99 | | Minus |
BO25932.pep Sequence
Translation from 16 to 1147
> BO25932.pep
MGHKMGGFLEKPETEKQAQEGHGNGLRYCVSSMQGWRLEMEDSHSAACRL
KDPFATWSYFAVFDGHAGSQISLHCAEHLMSTILESESFSKHKYEAGIRE
GFLQLDEDMRKLYHDQQGGSTAICVFVSPDKIYLVNCGDSRAVISRNGAA
VISTIDHKPFSPKEQERIQNAGGSVMIKRINGTLAVSRAFGDYDFKNDGS
KSPVDQMVSPEPDIIVCNRSEHDEFIVVACDGIWDVMTSSEVCEFIRSRL
LVTYDLPMIVNSVLDICLHKGSRDNMTLLLLLLPGAPKVDMDAVKAERSL
DQTIVQITKEVIEKHEIHDFETLIRLMKRMAINIPNLPPGGGLYAKYYII
EQAFHEKFPDTPAEIYDYFSMASFLDH
BO25932.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:11:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6036-PA | 371 | CG6036-PA | 1..371 | 1..371 | 1954 | 100 | Plus |
| alph-PB | 371 | CG1906-PB | 1..368 | 5..368 | 1050 | 53.4 | Plus |
| alph-PC | 368 | CG1906-PC | 1..364 | 5..364 | 1036 | 53.4 | Plus |
| alph-PD | 368 | CG1906-PD | 1..364 | 5..364 | 1036 | 53.4 | Plus |
| alph-PA | 368 | CG1906-PA | 1..364 | 5..364 | 1036 | 53.4 | Plus |
