BO25937.complete Sequence
772 bp assembled on 2010-06-29
> BO25937.complete
GAAGTTATCAGTCGACATGACCACTTGTTGCCTTGGAAACGCTGAGGATA
AACGTAAACAAAAGATGATGGACTGGGCCGAAGAACTCAAGATGACCATA
AGAAAGACGACGGCCAGGAAGGGTCGGCGCTCCAAGAGTCGCGATGTTCT
GAAGGAGGAGGATGTCCAGGCGGCTGGGGGCTCCAAGGACATTTCCATCG
ACATTACGCTGAATGTCCAGGCGGGCACCCCACCGACCACCTCGGACACG
GCCACCTCGTCCACATACAACAATGAATTCGAGTCACATCGACCACCCAT
TCGTCGCATTTCAGGTGGCTGGGCGGATTCTGGACTCAAAGGATTAAAGT
CTAAGAAAAACTCCTTTGATGATGAGCGCTTTAAACAAACAAAGTCGGCT
ACAAATTCCATACCAACGGATGACATTCCCGTCATCCCAGACATGGATGA
TGTCAAGGACGAAATCATGCTCAATGAGATTGTAGAACCGCCAACTATTG
GCACCTCACGATCTGCTGTTTTGAAGGAGGCCAATTCCGATTTGCTTTCC
CAGTACGCCTTTTCAGCTGTGGATGGCTTTGATCTCTCAATCCTCACCGA
TTGCCTGGTTCCACAGGAGAGCCTCAACGAGAAGGACGATCTCTGGCAGT
GGGACAAGCTGTTCACCGAGGTCACGGCTGAAATCCATTCGGATAAAGTG
CCCAATATGGGCATGAAAATAGGACCCGATGTGATTCCACCCACACAATA
TACTGCAAGCTTTCTAGACCAT
BO25937.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:37:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5780-RB | 690 | CG5780-PB | 1..687 | 68..754 | 3420 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:37:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5780-RB | 881 | CG5780-RB | 25..763 | 16..754 | 3680 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:37:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12693990..12694248 | 754..496 | 1295 | 100 | Minus |
2L | 23513712 | 2L | 12694572..12694817 | 350..105 | 1230 | 100 | Minus |
2L | 23513712 | 2L | 12694304..12694426 | 495..373 | 615 | 100 | Minus |
2L | 23513712 | 2L | 12694874..12694964 | 106..16 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:37:02 has no hits.
BO25937.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:46:17 Download gff for
BO25937.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5780-RB | 20..757 | 17..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:38:43 Download gff for
BO25937.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5780-RB | 26..763 | 17..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:42 Download gff for
BO25937.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5780-RB | 26..763 | 17..756 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:42 Download gff for
BO25937.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12693988..12694248 | 496..756 | 99 | <- | Minus |
2L | 12694304..12694426 | 373..495 | 100 | <- | Minus |
2L | 12694494..12694517 | 349..372 | 95 | <- | Minus |
2L | 12694574..12694815 | 107..348 | 100 | <- | Minus |
2L | 12694874..12694963 | 17..106 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:38:43 Download gff for
BO25937.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12693988..12694248 | 496..756 | 99 | <- | Minus |
arm_2L | 12694304..12694426 | 373..495 | 100 | <- | Minus |
arm_2L | 12694494..12694517 | 349..372 | 95 | <- | Minus |
arm_2L | 12694574..12694815 | 107..348 | 100 | <- | Minus |
arm_2L | 12694874..12694963 | 17..106 | 100 | | Minus |
BO25937.pep Sequence
Translation from 16 to 772
> BO25937.pep
MTTCCLGNAEDKRKQKMMDWAEELKMTIRKTTARKGRRSKSRDVLKEEDV
QAAGGSKDISIDITLNVQAGTPPTTSDTATSSTYNNEFESHRPPIRRISG
GWADSGLKGLKSKKNSFDDERFKQTKSATNSIPTDDIPVIPDMDDVKDEI
MLNEIVEPPTIGTSRSAVLKEANSDLLSQYAFSAVDGFDLSILTDCLVPQ
ESLNEKDDLWQWDKLFTEVTAEIHSDKVPNMGMKIGPDVIPPTQYTASFL
DH
BO25937.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:11:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5780-PB | 229 | CG5780-PB | 1..229 | 18..246 | 1186 | 100 | Plus |