BO25952.complete Sequence
2035 bp assembled on 2010-07-15
GenBank Submission: KX799577
> BO25952.complete
GAAGTTATCAGTCGACATGCATCAGAATATATGGAGCGCGCCGCAGGTGG
GTGGTTCTGGTGGCGCTTTGAAGGCCTTGGCCAGGAATGTGGCCAATCAT
CTGAAGCTGAACCGCAGCAATATGAAACGAGTGGTGGCCCAGGTGGTCGC
CGAGCACCATACCCTCGGGGAGGTGGCCGACTACAAGGGTCACATGTACT
TTGCCAAGCCGGATCGCTTGAATTTTCACGAGCTGATTGCCCAGTCCAAG
GAGGCCTTCGATGATCTGTTGCTCCACGAACCGCGATCTGTGAAAAAGCA
AGCAATCACGAAACGTTCCAAGCATCCGACCAATCCCAACGTTAAACTAC
AGATGACAGTATCACCACCGCAATTAGAAAAACCACAAAAGAAACAATTA
ACTTTTAAAAAGTCTGGTCTACCGAAAAAACATTCAAGGCCAAAAATTCG
GAGTCGGAAGAAGAGTTCCACCACCATTTTTCAGCTGGCGGATGCAGGTC
GTCGTAGTCTAAATGGTGTAATCATTGACGAAACTCATTTGCCCCTAGAT
GGTGAGCAAAGGGAGATCCTTTTGCATGTGCCACCGTCGCTAGTCAAGCG
GTCCCGAAGGCGTCTCCGATCTGCCCAGATCAAGAATACATCGGAGAAAT
GCCCACCGCAGAAACCGGATAAGGATCCCGATCAGAAGAAGACAGGATCA
CAACAGAAGGATGGCGAGAAATTCACCGAGGAGAAGATTCTTCAAGTTCA
AAAGCGTCAACCCGAGAAGAAACGCAGCGAAGAACCGAAACCAGTAAAGA
AAATTCAGGAAAACCACCAGAAAGAGCTGATTCGGTCACCTTCTCGCCCC
CGATCGGGGTCCCCTTCGGTTCCTCAGACCCGACGGTCTCCTTCACCAGT
TCGTTCACAAAAACTGACATCTGTTCAGAAAGCGAGCCAAGCTCTTCGCT
CACCACCCCACAAGACATTAAATGTCAAGAATCAACGCATCAGGGCGGGA
GACACCAAAATGGCAACTTCCAAGCCTTCGGAAAAGATCAAATCGAGATC
GATGCTAAGAACAGTCAAGAAAAAACTTCCATTGCCGCAAAGAAGCTACG
ACAAGCCGTGGATACTGAAACGCTCTAAAAAGAGACGCTTGGCGGGAGGA
TCTCAATTAAAGAAAAATCTACAGCGACCGATCAATATCGATGTGAAGAG
AAGGGAAAAGTCAGGTAAGGGAGGGAAAATCCAGCATTCAGCAAGGAGCA
CCAAGGTGGAGCCAACGAAAATCTCTGCCCAGATTAAAGCCACATCACAT
GTTGGACGCCAAATGCAAAGGGTAAACTTTCCGTGGTATACTCCCTATCA
ATTTCAAGGTGCCGCCGGAGCAACCCAAATACCAAATGCCGGGGTCGCCA
TACCGCCGTGTCAATTGCTAAAAGATAAAAGCCGTAAACTCATTCAAAGA
CTATCGGTAACCCAACCAATTCCCCAAATTAAACGTCCCAATATCACCAG
TCGCCAAAGGCATAATCTCCGTTTGCGGGAGCGTTTGATGAGAGATTTGC
AACGCGAAGAGGACATCGATGATCCACTAAGTAATGGATCGGGGGTTCTT
CGCCGAGCCCGCGGTGGAATGCAATCATCTCAGCAAATTAAGGAACCTGA
GCAACCTGAAAAGGAGCAGGATCATCGTTCTGTGGAGCGCGTGAGCTCGC
GAATCAAGCGTTTGCCAAAGGGAAGACGCTATCGCCAGCCCATCGCCACC
AGCGAGCGGATCATGATCCCGCCACCGAAGGTGAATAATAATAATAATAC
TAATAATAAATCGATGTCTCCAAGTCGCCCCAACTCCATTCCACGAGTCC
GTCGAAGATTTCGATCCGTTCTGGTGGACAGCAGTTTGGGAAGTATCGCC
TTAATGGGTCAGCCGGTGCAATCAAAGCAAACACTAACTCCCGCTAAACG
TCATCTTACCATTGCCTTTATGAACAAGAGATCAGAACGAACCAATGCAG
CCGTTCAGCCCTGGAAGGCAAGCTTTCTAGACCAT
BO25952.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:59:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11369-RA | 2004 | CG11369-PA | 1..2001 | 17..2017 | 10005 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:59:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11369-RA | 2478 | CG11369-RA | 309..2309 | 17..2017 | 10005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:59:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7574598..7576598 | 17..2017 | 10005 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 04:59:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 6746..6864 | 293..411 | 117 | 57.5 | Plus |
BO25952.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 10:00:56 Download gff for
BO25952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11369-RA | 1..2001 | 17..2019 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:39 Download gff for
BO25952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11369-RA | 309..2309 | 17..2019 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:41:25 Download gff for
BO25952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11369-RA | 309..2309 | 17..2019 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:41:25 Download gff for
BO25952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7574598..7576598 | 17..2019 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:39 Download gff for
BO25952.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7468631..7470631 | 17..2019 | 99 | | Plus |
BO25952.pep Sequence
Translation from 16 to 2035
> BO25952.pep
MHQNIWSAPQVGGSGGALKALARNVANHLKLNRSNMKRVVAQVVAEHHTL
GEVADYKGHMYFAKPDRLNFHELIAQSKEAFDDLLLHEPRSVKKQAITKR
SKHPTNPNVKLQMTVSPPQLEKPQKKQLTFKKSGLPKKHSRPKIRSRKKS
STTIFQLADAGRRSLNGVIIDETHLPLDGEQREILLHVPPSLVKRSRRRL
RSAQIKNTSEKCPPQKPDKDPDQKKTGSQQKDGEKFTEEKILQVQKRQPE
KKRSEEPKPVKKIQENHQKELIRSPSRPRSGSPSVPQTRRSPSPVRSQKL
TSVQKASQALRSPPHKTLNVKNQRIRAGDTKMATSKPSEKIKSRSMLRTV
KKKLPLPQRSYDKPWILKRSKKRRLAGGSQLKKNLQRPINIDVKRREKSG
KGGKIQHSARSTKVEPTKISAQIKATSHVGRQMQRVNFPWYTPYQFQGAA
GATQIPNAGVAIPPCQLLKDKSRKLIQRLSVTQPIPQIKRPNITSRQRHN
LRLRERLMRDLQREEDIDDPLSNGSGVLRRARGGMQSSQQIKEPEQPEKE
QDHRSVERVSSRIKRLPKGRRYRQPIATSERIMIPPPKVNNNNNTNNKSM
SPSRPNSIPRVRRRFRSVLVDSSLGSIALMGQPVQSKQTLTPAKRHLTIA
FMNKRSERTNAAVQPWKASFLDH
BO25952.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:32:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11369-PA | 667 | CG11369-PA | 1..667 | 1..667 | 3418 | 100 | Plus |
