BO25969.complete Sequence
2464 bp assembled on 2010-07-15
GenBank Submission: KX799792
> BO25969.complete
GAAGTTATCAGTCGACATGACGGATAAAAAAAATGAAATACAGCCAGCGG
CTGAGCCTGTGGCTGAACCAGAGCCTTCTCCCGCGGCCGAAATAGCTCCT
GCAAGTCCCGATGGCTCCGGTCCAAGTGCTGCCGCTGCAGAAGAAGTCAC
CCCGAGTGTTGCGACCGTTGAAGACACTACCCCGATTGCAGCCCCTGCAG
AGAGTCAACCGTCCGGCGAGAGCAACGGCACGGCGGAGGCCAAGAAGCTG
CCCGAGATCGCTAAAAAGAATGGCAAGGAGCCCGACCAGAATGACAAGGA
GCCCGACCAGAATGGCAAGGAACTGGCAGAGACCAATGACTTCAAGAACG
TCTCCGAGACTGAGGGTCAGCAGAAGAAACTGCCCTACCCCAAGTCCGTG
TTCTTCATCATCAGTAACGAATTCTGCGAACGTTTCAACTATTACGGCAT
GAGGACTGTTTTGGTTCTGTATCTGAGTCGAGTTCTGGGCTATTCTGATG
ATACCGCCACCGTGGTCTTCCATATCTTCACCATGTTCGTGTACTTCCTG
TGCGTTTTTGGAGCCATCATTTCGGACTCTTGGCTGGGAAAATTCAAGAC
TATCCTGTATTTATCGCTGGTTTATATATGCGGATCGGTGCTGCTGACCC
TAGGTGCCATTGGACCACTTAACCTGCCCATGGAAACGTTTACGATGTTG
GGCCTGGCGTTAATTGCCCTTGGTTCAGGCGGCATTAAGCCGTGTGTGTC
GGCATTCGGTGGCGATCAGTTTAAGGTGCCGGAGCAGGTGAAGCAGATCA
CTTCGTTCTTCTCGCTCTTTTACTTTTCGATCAATGCCGGATCGCTGATC
TCCACCACGGTGACTCCAATATTGCGCGAGGACGTGTCCTGCTTTGACGA
CATTAACTGCTATCCATTGGCCTTTGGAGTACCGGCCGTACTTATGATTG
TGTCGGTGATCATCTTCGTTTTGGGACGATCCCTGTACAAGATGAAGCCA
CCGGCCGGAAATATGGTGGTGCTTGTGAGCAGTACCATCTGGACAGCCCT
GACCACCAAATGTAAGGAGAAAAAGACCAATCCGCGGGAGCACTGGCTGG
ACTATGCCGATAAAAAGTACGACCGCCAGTTGATTGACGATGTAAAGGTC
CTTATGCGAGTCCTCTTCCTCTACCTGCCACTTCCGGTCTTCTGGGCACT
GTTTGATCAGCAGGGCTCCCGTTGGACCTTCCAGGCCACCCGAATGGACG
GCGACATGGGCTCCTGGGACATCAAGCCCGACCAGTTGCAAGTGCTCAAT
CCTCTGCTCATCCTAATCTTTATACCGTTGTACGATGTGGCCCTCTATCC
GGCCCTGAAACTAGTGGGTATCCGACGACCGCTGCAGAAACTCACCATGG
GCGGCATCCTTGCGGGCATTGCTTTCATCATTTCCGGAGTGGTGGAGCTT
AGCTTGGAGAAAACCTATCCCGACCTGCCCTACAGCCAGAACATCCAACT
GCGCATCTTCAACGCGGACAACTGCGACTACTTCTTCACTTCGAACATTC
CGGGAGCGGAAAATGTGACGGTGACCTCGTTGAATGCCTATACCAACAAG
GATATTTACGCACCCGGTTCGCTGGACGTGGAGTTCTCGCTCAGCAGTGC
AAGTGAAGCTTGTACCATTAGCGCTGACAAAATACCTAAAGTCCTTACTG
ATAATACGGCTTGGTCTCTGTTCCTCAATCCGCTAAATGGTAGTGGATAC
TACTGGGAGGAGGATTTTGTGGACAAGCCGAGCCAGAGCCATCCGCTGAT
CCGAAACGTCGCTAATGTGCCGCAGGAGCTGTCAATTCGTTGGGAAAAGG
CTAGCACGGGAGAGGTGGTCTATGACGACCTGGCTAGCAAAACGTTGCTC
ACGCGTGTGAATTCGGCGGAGTATGTAGTCATGGTGGGCGAAAGGAACGT
CGGAACATTCGATGTTCACACCGGCGGCGTGTACACACTCCTGATTAAAG
ATAACAACAACATTTACGAGGCCAATTTGGAGGAAGTGACGAGCCCCAAC
TCGGTAAAGATCCTTTGGCTGGTGCCGCAGTACGTGGTGATGACCCTCGG
CGAGGTGATGTTCTCGGTGACGGGACTGGAGTTCTCATACGCCCAGGCAC
CACCCAGCATGAAGAGTGTCCTGCAGGCCTGTTGGCTGCTAACGGTGGCC
TTCGGCAACGTCATTGTGGTCGTCATCGCCGAGGCCGCCTTATTCGAATC
GCAGGCCAGCGAGTTCTTCCTGTTCGCCGGCCTCATGTTCGCCGACATGT
TGATCTTCATGGTGATGGCCTACTACTATGTGCCCAACGATCCGAACAAG
GTGGAGGAGGCCCAGCCCCTGACGGCGGGTGATGCCAAAACAGAGATTCC
CGCTCTCGAAGGCGGAGTCGAGAACAAGGGCAAGGACATCAACGAGGCAA
GCTTTCTAGACCAT
BO25969.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2930-RF | 2433 | CG2930-PF | 1..2430 | 17..2446 | 12150 | 100 | Plus |
| CG2930-RB | 2433 | CG2930-PB | 1..2430 | 17..2446 | 12150 | 100 | Plus |
| CG2930-RA | 2433 | CG2930-PA | 1..2430 | 17..2446 | 12150 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:00:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2930-RF | 3701 | CG2930-RF | 1067..3498 | 15..2446 | 12160 | 100 | Plus |
| CG2930-RB | 2818 | CG2930-RB | 184..2615 | 15..2446 | 12160 | 100 | Plus |
| CG2930-RA | 2773 | CG2930-RA | 139..2570 | 15..2446 | 12160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:00:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3876455..3877458 | 456..1459 | 5020 | 100 | Plus |
| X | 23542271 | X | 3877626..3878614 | 1458..2446 | 4945 | 100 | Plus |
| X | 23542271 | X | 3875901..3876242 | 35..376 | 1710 | 100 | Plus |
| X | 23542271 | X | 3879893..3880180 | 2042..2329 | 795 | 85.1 | Plus |
| X | 23542271 | X | 3876313..3876393 | 375..455 | 405 | 100 | Plus |
| X | 23542271 | X | 3863481..3863602 | 2208..2087 | 310 | 83.6 | Minus |
| X | 23542271 | X | 3864384..3864511 | 1314..1187 | 265 | 80.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 05:00:26 has no hits.
BO25969.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 10:00:59 Download gff for
BO25969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2930-RB | 178..2607 | 17..2448 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:05:44 Download gff for
BO25969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2930-RA | 141..2570 | 17..2448 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:41:47 Download gff for
BO25969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2930-RA | 141..2570 | 17..2448 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:41:47 Download gff for
BO25969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3873158..3873176 | 17..35 | 100 | -> | Plus |
| X | 3875902..3876242 | 36..376 | 100 | -> | Plus |
| X | 3876315..3876393 | 377..455 | 100 | -> | Plus |
| X | 3876455..3877458 | 456..1459 | 100 | -> | Plus |
| X | 3877628..3878614 | 1460..2448 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:05:44 Download gff for
BO25969.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3767191..3767209 | 17..35 | 100 | -> | Plus |
| arm_X | 3769935..3770275 | 36..376 | 100 | -> | Plus |
| arm_X | 3770348..3770426 | 377..455 | 100 | -> | Plus |
| arm_X | 3770488..3771491 | 456..1459 | 100 | -> | Plus |
| arm_X | 3771661..3772647 | 1460..2448 | 99 | | Plus |
BO25969.pep Sequence
Translation from 16 to 2464
> BO25969.pep
MTDKKNEIQPAAEPVAEPEPSPAAEIAPASPDGSGPSAAAAEEVTPSVAT
VEDTTPIAAPAESQPSGESNGTAEAKKLPEIAKKNGKEPDQNDKEPDQNG
KELAETNDFKNVSETEGQQKKLPYPKSVFFIISNEFCERFNYYGMRTVLV
LYLSRVLGYSDDTATVVFHIFTMFVYFLCVFGAIISDSWLGKFKTILYLS
LVYICGSVLLTLGAIGPLNLPMETFTMLGLALIALGSGGIKPCVSAFGGD
QFKVPEQVKQITSFFSLFYFSINAGSLISTTVTPILREDVSCFDDINCYP
LAFGVPAVLMIVSVIIFVLGRSLYKMKPPAGNMVVLVSSTIWTALTTKCK
EKKTNPREHWLDYADKKYDRQLIDDVKVLMRVLFLYLPLPVFWALFDQQG
SRWTFQATRMDGDMGSWDIKPDQLQVLNPLLILIFIPLYDVALYPALKLV
GIRRPLQKLTMGGILAGIAFIISGVVELSLEKTYPDLPYSQNIQLRIFNA
DNCDYFFTSNIPGAENVTVTSLNAYTNKDIYAPGSLDVEFSLSSASEACT
ISADKIPKVLTDNTAWSLFLNPLNGSGYYWEEDFVDKPSQSHPLIRNVAN
VPQELSIRWEKASTGEVVYDDLASKTLLTRVNSAEYVVMVGERNVGTFDV
HTGGVYTLLIKDNNNIYEANLEEVTSPNSVKILWLVPQYVVMTLGEVMFS
VTGLEFSYAQAPPSMKSVLQACWLLTVAFGNVIVVVIAEAALFESQASEF
FLFAGLMFADMLIFMVMAYYYVPNDPNKVEEAQPLTAGDAKTEIPALEGG
VENKGKDINEASFLDH
BO25969.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:32:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2930-PF | 810 | CG2930-PF | 1..810 | 1..810 | 4183 | 100 | Plus |
| CG2930-PB | 810 | CG2930-PB | 1..810 | 1..810 | 4183 | 100 | Plus |
| CG2930-PA | 810 | CG2930-PA | 1..810 | 1..810 | 4183 | 100 | Plus |
| CG2930-PE | 815 | CG2930-PE | 12..815 | 7..810 | 4151 | 100 | Plus |
| CG2930-PD | 803 | CG2930-PD | 1..777 | 1..775 | 3173 | 80.6 | Plus |
