BO25990.complete Sequence
679 bp assembled on 2010-06-29
GenBank Submission: KX796668
> BO25990.complete
GAAGTTATCAGTCGACATGGTTCTTATTATGCGTGTTTCCCCGCCGGAAC
ATGGTCTGTTGTATACGGCAAACAATATCAAGCTGAAACTAGGCGACAAA
GTGGTGGGCGAAGGCACAGTTTACATTGCCCAAAACACGCTATCCTGGCA
GCCAACTGAATTGGCGGAGGGTATATCCATTGAGTGGAAGCAGGTTAGCC
TGCACGGTATCTCTTCGAATCCGAGAAAGTGCATCTACTTCATGCTGGAC
CACAAAGTCGAGTGGAACGGCGTCTACGGAGATCCTCCCCAGCAGGCAGT
CAATGGTCGGAATGGCGGTGGTTCGGAAGCGGAAGTGGACGAGGGAAATG
GCAGCGATGAGCACGATGAGGACGACAATTTCGAGGATGCCGTAGACGAG
CAATTTGGAGAGGTCACAGAGTGCTGGCTTATGCCGGAGGACATTCACAC
CGTAGACACTATGTACAGTGCCATGACGACTTGCCAGGCCCTACATCCTG
ATTCGGCAAACAGTGATTCGGAAGACAGCGATCCTATGCAGGATGCCGGT
GGCTTAGAGGATGAGGCTATGGAGGAGGATGATGCATTGACGCTTGGGCG
CAACGGCGTGCAGAATCTCAGTTTGGACGACGACGAAGAGCGATTCGAGG
ACGCTGATGAGGCAAGCTTTCTAGACCAT
BO25990.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:34:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
icln-RA | 648 | CG4924-PA | 1..645 | 17..661 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:34:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
icln-RA | 832 | CG4924-RA | 70..714 | 17..661 | 3225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:34:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17591238..17591763 | 136..661 | 2630 | 100 | Plus |
2R | 25286936 | 2R | 17591033..17591151 | 17..135 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:34:44 has no hits.
BO25990.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:46:03 Download gff for
BO25990.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
icln-RA | 68..712 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:48 Download gff for
BO25990.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
icln-RA | 70..714 | 17..663 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:55 Download gff for
BO25990.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
icln-RA | 70..714 | 17..663 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:55 Download gff for
BO25990.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17591033..17591151 | 17..135 | 100 | -> | Plus |
2R | 17591238..17591763 | 136..663 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:48 Download gff for
BO25990.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13478538..13478656 | 17..135 | 100 | -> | Plus |
arm_2R | 13478743..13479268 | 136..663 | 99 | | Plus |
BO25990.pep Sequence
Translation from 16 to 679
> BO25990.pep
MVLIMRVSPPEHGLLYTANNIKLKLGDKVVGEGTVYIAQNTLSWQPTELA
EGISIEWKQVSLHGISSNPRKCIYFMLDHKVEWNGVYGDPPQQAVNGRNG
GGSEAEVDEGNGSDEHDEDDNFEDAVDEQFGEVTECWLMPEDIHTVDTMY
SAMTTCQALHPDSANSDSEDSDPMQDAGGLEDEAMEEDDALTLGRNGVQN
LSLDDDEERFEDADEASFLDH
BO25990.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:27:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
icln-PA | 215 | CG4924-PA | 1..215 | 1..215 | 1152 | 100 | Plus |