BO25991.complete Sequence
991 bp assembled on 2010-06-29
GenBank Submission: KX794480
> BO25991.complete
GAAGTTATCAGTCGACATGGCGAGCAAAAGAAAGCACCAAGCATCCCAGA
AAGTGAAAGAGGAATCCTTCAAGAAACACACGCTTGACTCCGATGAAGAG
GATTCTGACGACTACGAAAGGGAATACCTCAATGATAGCGACATTGAGGG
CGGCGAGGAGGGCGTGGCAAAAGTGGAAGACGATGTGAAGGTAACACCCT
TCAATATGAAGGAAGAACTGGAGGAGGGACACTTCGACAAAGATGGTCAC
TACCATTGGAACAAGGAGACGGAAGCAAAGGACAATTGGTTGGACAACAT
AGACTGGGTTAAAATTGGCACACAGAAGAACGCCTTCGACCCGGCAAAAG
ATGAAGAAAACTCTTCCGATGAGGAGAAGAACGAACCCGTGGGCAAGGCC
TTTAACTTGTCCATGAACCTCATGAAAATGGTCGAGTTTATGAAACCGGG
AGAGACTGTCAAGATGACCCTGCAGCGTCTGGGTAAGCAGCGCCCCGTCC
TAACAACCCTTCAGAGGATTAAGCAGAAAAAGGCCGGCATCGTTGACCCA
AAGACACAGGAAATCTCTCAGCTCACCGAGCTGGCCAACGAGATTCTCTC
GAAGACGGGCAATATGGATATATATCAGGATACGTACGAAAGCATCAAGG
CCAAGATCGCCGATTTGCCAGGAACGAGCAAACCTAAAGTAGCCGATGAT
ATTGATATGTATGCAGATGATTTCGAAACGAAAGAATTGGAGCGCTCTAA
GACATCGTCGAGTGATAGCTCCAAACCAACGACGACTACCTCAGAGGTGA
CCTGGGAGTTTAAATGGTCGCAGGATGAGACTGATATCCAGGGACCCTTT
TCCACGGAGAAAATGTTGAAATGGTCCCAGGAGAACTACTTTAAAAACGG
AGTCTATGTGCGAAAGTGCGGCGAAAACACAAATTTCTATACAAGCAACC
GCATAGATTTCGATTTGTACTTGGCAAGCTTTCTAGACCAT
BO25991.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:34:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| holn1-RA | 960 | CG5198-PA | 1..957 | 17..973 | 4785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:34:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| holn1-RA | 1198 | CG5198-RA | 92..1048 | 17..973 | 4785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:34:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10436507..10437166 | 314..973 | 3300 | 100 | Plus |
| 2L | 23513712 | 2L | 10436247..10436441 | 119..313 | 975 | 100 | Plus |
| 2L | 23513712 | 2L | 10436086..10436194 | 17..125 | 530 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:34:35 has no hits.
BO25991.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:46:02 Download gff for
BO25991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5198-RA | 96..1052 | 17..975 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:44 Download gff for
BO25991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| holn1-RA | 92..1048 | 17..975 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:53 Download gff for
BO25991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| holn1-RA | 92..1048 | 17..975 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:53 Download gff for
BO25991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10436086..10436189 | 17..120 | 100 | -> | Plus |
| 2L | 10436249..10436441 | 121..313 | 100 | -> | Plus |
| 2L | 10436507..10437166 | 314..975 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:44 Download gff for
BO25991.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10436086..10436189 | 17..120 | 100 | -> | Plus |
| arm_2L | 10436249..10436441 | 121..313 | 100 | -> | Plus |
| arm_2L | 10436507..10437166 | 314..975 | 99 | | Plus |
BO25991.pep Sequence
Translation from 16 to 991
> BO25991.pep
MASKRKHQASQKVKEESFKKHTLDSDEEDSDDYEREYLNDSDIEGGEEGV
AKVEDDVKVTPFNMKEELEEGHFDKDGHYHWNKETEAKDNWLDNIDWVKI
GTQKNAFDPAKDEENSSDEEKNEPVGKAFNLSMNLMKMVEFMKPGETVKM
TLQRLGKQRPVLTTLQRIKQKKAGIVDPKTQEISQLTELANEILSKTGNM
DIYQDTYESIKAKIADLPGTSKPKVADDIDMYADDFETKELERSKTSSSD
SSKPTTTTSEVTWEFKWSQDETDIQGPFSTEKMLKWSQENYFKNGVYVRK
CGENTNFYTSNRIDFDLYLASFLDH
BO25991.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:27:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| holn1-PA | 319 | CG5198-PA | 1..319 | 1..319 | 1682 | 100 | Plus |
