BO26018.complete Sequence
1345 bp assembled on 2010-06-29
GenBank Submission: KX798787
> BO26018.complete
GAAGTTATCAGTCGACATGTCAAAGCGCTGCTGGAACCGCAACCAGCGCT
CGGTGTCCCTGCCCAGGAGCGAATTCGTCGAAATAAACCCCATGATGCCC
GGCAGGAGCACCGCAGCTGAAGGCGCACGCGGGAGAGCATCATCCGGACC
TCGGATGACCGTGGAGACCCTGTTCCATACTTCTCACTCGGCGAAGAAGG
AGCGTCCACAGCAGGGTGCAAAACCCATGGAAAACCGAGTTTTGAAGGAA
AGCTCCACGTCTAAGAATTCGCGTGAGATGCCTTCTCTGCTACTCTCCAC
CAAGGGCAGGCCAGATGGCACTTGGAATAATATGAGAGCCAAGGAAAACA
AGCAGCATCGCAAAGAAGGGAGTCGCCACCTGGCTGCAACTTCCACGATG
CCCAAGATGGATGAGCTTGGACCCGACTGGCGAAAACCTTGGCCGATCGG
CGGTTTTTCTCGGAATAATCGTAGTAGCCCTCAGATGTTCAGTACAGTTC
CTTCGAAAAGTTCTGTTAACATTTCAAGAGACAACAACAATTATCCCGAT
TTAAAAATAGAAGACACTGGGAAAAAGAGCCACACAGTCACAGGAAAGGC
ACCGAACACGCGTGCAGAAGATCAAAGGTCAGGAATGGTGGCCCATCTAA
GCGGTCTAAATAGCAAGACTAAGCACACGAGGCTGATGAGTACTTCCAAG
CGCTGCAAAGCAGGTTCGGAAGATTCTGTTTACCATCAGACCCTGAATGA
TGTCATCTCCCAGTGGGATTGCCAGCCGTCGACCAGTAAAAGTAATCCAT
GCCAGATTCCGAAGATTCCGAATCTGCCGTCCGGATGGACAGCTTCGCCG
AGCAAAGACGCGGACTTCCCTTTCATGGCGGATCTGGAAAATAGGATGGG
GGTCGAAAGTCTGATGCCCGAGCTGCTGACTCCATCGCGCACCTCCCAGC
CGCTGACAAAGAATTCTCCGCCTTGGGACTTGTATGCCTTGATGGGCAAC
GACGACAAATTTCCGCTTAGCATCTGCACCGATGAGAGATCCAAAAATGA
TCCATTGTGGGGCTCCACTTGCATTAACTGGGAAGAAAGCAGCGGCAGGA
ACTTGGACTTGAACCACGTCTGCGAGAGGGCCTTGGGAAAATTCCCAGGC
CCATCTGCTACTCCGGGAAACGTGGAAGATTGGCAGGCCATCGAGACTAT
TTGCATGCGTTTGAGGGGCTTCGATATGCCGGGCGACCTGGGTGTTCTGA
TGGAACCTCCATCCTTGGATGATGTACTCGAGGTTATCGGGGACTTGGAG
GCGGAGAACAAGAAGGATCTGAAGAATGCAAGCTTTCTAGACCAT
BO26018.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:27:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13577-RB | 1314 | CG13577-PB | 1..1311 | 17..1327 | 6555 | 100 | Plus |
| CG13577-RC | 696 | CG13577-PC | 1..693 | 635..1327 | 3465 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:27:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13577-RB | 1744 | CG13577-RB | 88..1398 | 17..1327 | 6555 | 100 | Plus |
| CG13577-RC | 906 | CG13577-RC | 1..837 | 491..1327 | 4185 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:27:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24267723..24269031 | 1327..19 | 6545 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:27:56 has no hits.
BO26018.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:48 Download gff for
BO26018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13577-RB | 72..1382 | 17..1329 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:58 Download gff for
BO26018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13577-RB | 88..1398 | 17..1329 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:17 Download gff for
BO26018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13577-RB | 88..1398 | 17..1329 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:17 Download gff for
BO26018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24267721..24269032 | 17..1329 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:58 Download gff for
BO26018.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20155244..20156555 | 17..1329 | 99 | | Minus |
BO26018.pep Sequence
Translation from 16 to 1345
> BO26018.pep
MSKRCWNRNQRSVSLPRSEFVEINPMMPGRSTAAEGARGRASSGPRMTVE
TLFHTSHSAKKERPQQGAKPMENRVLKESSTSKNSREMPSLLLSTKGRPD
GTWNNMRAKENKQHRKEGSRHLAATSTMPKMDELGPDWRKPWPIGGFSRN
NRSSPQMFSTVPSKSSVNISRDNNNYPDLKIEDTGKKSHTVTGKAPNTRA
EDQRSGMVAHLSGLNSKTKHTRLMSTSKRCKAGSEDSVYHQTLNDVISQW
DCQPSTSKSNPCQIPKIPNLPSGWTASPSKDADFPFMADLENRMGVESLM
PELLTPSRTSQPLTKNSPPWDLYALMGNDDKFPLSICTDERSKNDPLWGS
TCINWEESSGRNLDLNHVCERALGKFPGPSATPGNVEDWQAIETICMRLR
GFDMPGDLGVLMEPPSLDDVLEVIGDLEAENKKDLKNASFLDH
BO26018.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:41:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13577-PB | 437 | CG13577-PB | 1..437 | 1..437 | 2341 | 100 | Plus |
| CG13577-PC | 231 | CG13577-PC | 1..231 | 207..437 | 1252 | 100 | Plus |
