Clone BO26027 Report

Search the DGRC for BO26027

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:260
Well:27
Vector:pDNR-Dual
Associated Gene/Transcriptbeg-RA
Protein status:BO26027.pep: Imported from assembly
Sequenced Size:1171

Clone Sequence Records

BO26027.complete Sequence

1171 bp assembled on 2010-06-29

GenBank Submission: KX794847

> BO26027.complete
GAAGTTATCAGTCGACATGTTGGCCGCCCGCAGATTACTACGATCACCGC
GGATTACCGGTGCCCTAAGCTGGTCCCGCTGGAGCAGCGATGCCGCGAAG
GCCACAACAGAAACCTCCGCCCTTTTGCAGAACGCGGAGAAGCGGCAGCA
ACTGCTCAACGAGCTTTCTGAGCCGCTGGAACAGAAAGGCCGGCCCGCCA
TCGATCCCAAGGAAACAAGTGTGATGCTCTTTCCCGGTCAGGGCACCCAG
TACGTGGGCATGGCCAAAGACCTGCTCCGGTTCCCGGGCGCCCGTCGCAT
CTTCGAGCTGGCCAACGAGGTGCTGAAATACGATCTGCTCAAGATCTGCC
TGGAGGGACCACGTGAGAAACTGAATCGCACGGAGCACGCTCAGCTGGCT
GTGATGGTATCCTCGCTGGCAGCACTGGAGCAGTTGCGTGAGGAGCGACC
CAAGGCCATTGAAACGTGTGTAGCTGCCGCAGGCTTTAGTTTGGGCGAGA
TTACCGCATTGGTGTACGCGGATGCCCTGCCTTTCGACAAGGCATTGCGA
TTGGTGCAGGTGCGGGCCACCGCCATGCAGGCGGCATGTGACCAGGCAGC
CGGAGCCATGGCGATGACTCTCTACGGACCGGATACCAATCTGGGAGAGG
CCTGCGCTCGCGCGCAGCAATGGTGTCTGGACAAAGGAGTGGAGTCGCCC
TACTGTGGCATCGCCAACTACATGTATCCGCACTGCAAGGTAGTGGCCGG
CAACGTAGAGGCCCTGGAGTTCCTGGAACAAAATGCCAAGTCCTTCAAAA
TCCGGCGGATGAAGAGATTGGCTGTCAGTGGCGCCTTTCACACTCCTCTA
ATGCAAAGCGCCGTGGAGCCATTTACCAAAGCCCTGAAAACGGTGCGACT
TCAGGACCCCGTCATTAGAGTGTACTCCAATGTGGATGGCAAACCCTATC
GCCATGCCAAGCACATCCTAACGCAGCTGCCCAAGCAAATCGTGAGGCCC
GTCAAGTGGGAGCAGACTCTCCACGAGATGTACGAGCGCAAGCAGGGCGT
CGACTTTCCACGCACCTTCGAATGCGGTCCTGGCAAAGGCCTGGTCCAGG
TCCTGGAAAAAGTAAATGCCAAGGCCGCTCAATCCAGCTTTAATGTTATA
GCCGCAAGCTTTCTAGACCAT

BO26027.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:27:53
Subject Length Description Subject Range Query Range Score Percent Strand
beg-RA 1140 CG7842-PA 1..1137 17..1153 5655 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:27:54
Subject Length Description Subject Range Query Range Score Percent Strand
beg-RA 1198 CG7842-RA 32..1168 17..1153 5655 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:27:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17035699..17036835 17..1153 5655 99.8 Plus
Blast to na_te.dros performed on 2014-11-26 14:27:51 has no hits.

BO26027.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:47 Download gff for BO26027.complete
Subject Subject Range Query Range Percent Splice Strand
CG7842-RA 21..1152 22..1155 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:56 Download gff for BO26027.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 37..1168 22..1155 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:15 Download gff for BO26027.complete
Subject Subject Range Query Range Percent Splice Strand
beg-RA 37..1168 22..1155 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:15 Download gff for BO26027.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17035704..17036835 22..1155 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:56 Download gff for BO26027.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17028804..17029935 22..1155 99   Plus

BO26027.pep Sequence

Translation from 16 to 1171

> BO26027.pep
MLAARRLLRSPRITGALSWSRWSSDAAKATTETSALLQNAEKRQQLLNEL
SEPLEQKGRPAIDPKETSVMLFPGQGTQYVGMAKDLLRFPGARRIFELAN
EVLKYDLLKICLEGPREKLNRTEHAQLAVMVSSLAALEQLREERPKAIET
CVAAAGFSLGEITALVYADALPFDKALRLVQVRATAMQAACDQAAGAMAM
TLYGPDTNLGEACARAQQWCLDKGVESPYCGIANYMYPHCKVVAGNVEAL
EFLEQNAKSFKIRRMKRLAVSGAFHTPLMQSAVEPFTKALKTVRLQDPVI
RVYSNVDGKPYRHAKHILTQLPKQIVRPVKWEQTLHEMYERKQGVDFPRT
FECGPGKGLVQVLEKVNAKAAQSSFNVIAASFLDH

BO26027.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:40:59
Subject Length Description Subject Range Query Range Score Percent Strand
beg-PA 379 CG7842-PA 1..379 1..379 1939 100 Plus