BO26039.complete Sequence
1606 bp assembled on 2010-06-29
GenBank Submission: KX796725
> BO26039.complete
GAAGTTATCAGTCGACATGGTGTTGACCGAGGTCCTCTTTGTGGTGGTCG
CCGCACTGGTGGCGCTCTACACTTGGTTCCAGCGCAACCATAGCTACTGG
CAACGCAAGGGCATACCCTATATTCCGCCCACGCCGATCATTGGCAACAC
CAAGGTGGTCTTCAAGATGGAGAACTCCTTTGGGATGCACCTATCGGAGA
TATACAATGATCCGCGGCTGAAGGACGAGGCTGTGGTGGGCATCTACTCC
ATGAACAAGCCCGGCTTGATAATACGCGACATAGAGCTGATCAAATCCAT
TCTGATCAAGGACTTCAATCGGTTCCACAACCGATACGCCCGCTGCGATC
CCCATGGCGATCCATTGGGCTATAATAACCTGTTCTTCGTCAGGGATGCC
CATTGGAAGGGAATTCGCACCAAGCTGACTCCCGTTTTCACCAGCGGCAA
GGTCAAGCAGATGTACACCCTTATGCAGGAGATTGGAAAGGATCTGGAGC
TGGCACTGCAGAGGCGTGGAGAGAAGAACTCTGGGAGTTTCATTACGGAG
ATTAAGGAGATCTGCGCTCAGTTCTCCACGGACAGCATAGCCACGATTGC
ATTTGGCATTCGTGCTAACAGCCTAGAGAATCCCAACGCAGAGTTCCGTA
ACTATGGACGCAAGATGTTCACCTTCACCGTAGCGCGTGCCAAGGACTTC
TTTGTGGCCTTCTTCCTGCCCAAGCTGGTGTCGCTGATGCGCATCCAGTT
CTTCACGGCGGACTTTTCCCACTTTATGCGCAGCACCATTGGTCACGTTA
TGGAGGAGCGAGAGCGATCGGGCCTGCTCCGCAATGATCTCATAGATGTC
TTGGTGAGTCTGCGCAAAGAGGCGGCTGCCGAGCCTTCGAAGCCTCACTA
TGCCAAGAACCAGGACTTCCTGGTGGCTCAGGCGGGCGTGTTTTTTACGG
CGGGTTTCGAGACCTCCTCCTCGACCATGTCTTTTGCCCTGTACGAGATG
GCCAAGCATCCAGAGATGCAGAAACGCCTGCGCGACGAGATCAACGAAGC
TTTGGTGGAGGGCGGTGGGTCATTGAGCTACGAGAAAATCCAGTCCCTGG
AGTATCTGGCCATGGTGGTGGACGAGGTGCTGCGCATGTATCCGGTGCTG
CCGTTCCTGGACCGCGAGTACGAGAGCGTGGAGGGACAGCCAGACTTGAG
CCTGAAGCCGTTCTACGACTACACTCTCGAGAACGGAACCCCTGTGTTCA
TACCCATCTATGCACTGCATCATGATCCAAAGTACTGGACCAATCCCAGC
CAATTCGATCCGGAGCGTTTCTCACCCGCGAACCGCAAGAACATAGTGGC
CATGGCATATCAACCCTTCGGATCTGGGCCGCACAACTGCATTGGCAGCC
GGATTGGCCTGCTACAGAGCAAACTGGGACTGGTCAGCCTGCTGAAGAAT
CACTCAGTGCGCAACTGCGAGGCCACCATGAAGGACATGAAATTCGATCC
CAAGGGTTTCGTGCTCCAGGCAGATGGTGGCATACATTTGGAGATAGTCA
ACGATCGCCTCTACGATCAGAGCGCTCCATCGCTCCAAGCAAGCTTTCTA
GACCAT
BO26039.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:27:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6g1-RB | 1575 | CG8453-PB | 1..1572 | 17..1588 | 7860 | 100 | Plus |
| Cyp6g1-RA | 1575 | CG8453-PA | 1..1572 | 17..1588 | 7860 | 100 | Plus |
| Cyp6g2-RA | 1560 | CG8859-PA | 910..1040 | 914..1044 | 205 | 77.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:27:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6g1-RB | 2074 | CG8453-RB | 206..1777 | 17..1588 | 7860 | 100 | Plus |
| Cyp6g1-RA | 2061 | CG8453-RA | 193..1764 | 17..1588 | 7860 | 100 | Plus |
| Cyp6g2-RA | 1989 | CG8859-RA | 925..1055 | 914..1044 | 205 | 77.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:27:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12186966..12187768 | 480..1282 | 4015 | 100 | Plus |
| 2R | 25286936 | 2R | 12186438..12186902 | 17..481 | 2325 | 100 | Plus |
| 2R | 25286936 | 2R | 12187827..12188134 | 1281..1588 | 1540 | 100 | Plus |
| 2R | 25286936 | 2R | 12189323..12189453 | 1044..914 | 205 | 77.1 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:27:47 has no hits.
BO26039.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:46 Download gff for
BO26039.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6g1-RA | 197..1768 | 17..1590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:54 Download gff for
BO26039.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6g1-RA | 193..1764 | 17..1590 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:13 Download gff for
BO26039.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp6g1-RA | 193..1764 | 17..1590 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:13 Download gff for
BO26039.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12186438..12186902 | 17..481 | 100 | -> | Plus |
| 2R | 12186968..12187768 | 482..1282 | 100 | -> | Plus |
| 2R | 12187829..12188134 | 1283..1590 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:54 Download gff for
BO26039.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8073943..8074407 | 17..481 | 100 | -> | Plus |
| arm_2R | 8074473..8075273 | 482..1282 | 100 | -> | Plus |
| arm_2R | 8075334..8075639 | 1283..1590 | 99 | | Plus |
BO26039.pep Sequence
Translation from 16 to 1606
> BO26039.pep
MVLTEVLFVVVAALVALYTWFQRNHSYWQRKGIPYIPPTPIIGNTKVVFK
MENSFGMHLSEIYNDPRLKDEAVVGIYSMNKPGLIIRDIELIKSILIKDF
NRFHNRYARCDPHGDPLGYNNLFFVRDAHWKGIRTKLTPVFTSGKVKQMY
TLMQEIGKDLELALQRRGEKNSGSFITEIKEICAQFSTDSIATIAFGIRA
NSLENPNAEFRNYGRKMFTFTVARAKDFFVAFFLPKLVSLMRIQFFTADF
SHFMRSTIGHVMEERERSGLLRNDLIDVLVSLRKEAAAEPSKPHYAKNQD
FLVAQAGVFFTAGFETSSSTMSFALYEMAKHPEMQKRLRDEINEALVEGG
GSLSYEKIQSLEYLAMVVDEVLRMYPVLPFLDREYESVEGQPDLSLKPFY
DYTLENGTPVFIPIYALHHDPKYWTNPSQFDPERFSPANRKNIVAMAYQP
FGSGPHNCIGSRIGLLQSKLGLVSLLKNHSVRNCEATMKDMKFDPKGFVL
QADGGIHLEIVNDRLYDQSAPSLQASFLDH
BO26039.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:40:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp6g1-PB | 524 | CG8453-PB | 1..524 | 1..524 | 2735 | 100 | Plus |
| Cyp6g1-PA | 524 | CG8453-PA | 1..524 | 1..524 | 2735 | 100 | Plus |
| Cyp6g2-PA | 519 | CG8859-PA | 4..517 | 6..515 | 1253 | 47.8 | Plus |
| Cyp6v1-PC | 520 | CG1829-PC | 5..517 | 4..510 | 1205 | 45.3 | Plus |
| Cyp6v1-PB | 520 | CG1829-PB | 5..517 | 4..510 | 1205 | 45.3 | Plus |
