Clone BO26055 Report

Search the DGRC for BO26055

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:260
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG5781-RA
Protein status:BO26055.pep: Imported from assembly
Sequenced Size:832

Clone Sequence Records

BO26055.complete Sequence

832 bp assembled on 2010-06-29

GenBank Submission: KX794714

> BO26055.complete
GAAGTTATCAGTCGACATGACCATCACCAACTGGTTTAATTGGTCCGTAA
AGGATTTAAGCAATGAGTCCCATGCGAGACCCAAGTTGATTCCGGGATTC
GACCAGTTGGATAAGAGGCTGCAGGCGGCGCTTCAGGAGCGGGACGTGCA
AAAGCATCAGCGCAAGCGTACACAGGCGGGTGGTGGCCAAAGCCAGGCAA
AGCCCAAAAAGCTCAAGACGACCAGAAAACAGACACCAAGGGTATGCAAA
TTCCAGAAGGTTTACACTGAGAAACGCAAGAAGCTAAAACGAGAGGCCAA
CATGCAAAGTAATGCGTTTCAGTTCCGGAGCAGACCTGTGCCCGATTTCG
AGCGATCTCATCGTCGTTTGGAAAGGCGCAAGCTGTACCTGAACTCTCTG
CAAACGGTGACGAAGCCCCGATGCCCTGCCACGCTGGCCACGTCAATGGT
CGCTTTAAACAAGCGCCTAAAGAAGCAAAGGCAGAGCCGAAAGACATCCG
ACTTTGTGCCCCGAATCAATCCAGGCTCTTCTATGGACTACCTCAACCGG
CAGCCCTTTACGCCGCTTGTCAAGTCCTCCTTTACCCATCCAAAACCTTT
TCATCTCCATACGTCGGAGCGTGCTCTGCGCCGCCAAGTGTATGACGAGA
GGAAAAGGATACGGATGGATCGGCGTTTGGAGCAGCAGACCATCGATTGG
TTTGCACGGGAAAGAAGCGAGTACTTTAAGCTACGCAAAATGACAAATTT
CAAGGCTACGCCGAATCCCTGGAAGCAAACAAGGGTCACCGCTAGAAAAG
ATTCTCAGGCAGCCGCAAGCTTTCTAGACCAT

BO26055.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:27:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG5781-RA 801 CG5781-PA 1..798 17..814 3990 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:27:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG5781-RA 898 CG5781-RA 53..850 17..814 3990 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:27:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 12696474..12697271 814..17 3990 100 Minus
Blast to na_te.dros performed on 2014-11-26 14:27:33 has no hits.

BO26055.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:45 Download gff for BO26055.complete
Subject Subject Range Query Range Percent Splice Strand
CG5781-RA 504..1301 17..816 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:50 Download gff for BO26055.complete
Subject Subject Range Query Range Percent Splice Strand
CG5781-RA 53..850 17..816 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:07 Download gff for BO26055.complete
Subject Subject Range Query Range Percent Splice Strand
CG5781-RA 53..850 17..816 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:07 Download gff for BO26055.complete
Subject Subject Range Query Range Percent Splice Strand
2L 12696472..12697271 17..816 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:50 Download gff for BO26055.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 12696472..12697271 17..816 99   Minus

BO26055.pep Sequence

Translation from 16 to 832

> BO26055.pep
MTITNWFNWSVKDLSNESHARPKLIPGFDQLDKRLQAALQERDVQKHQRK
RTQAGGGQSQAKPKKLKTTRKQTPRVCKFQKVYTEKRKKLKREANMQSNA
FQFRSRPVPDFERSHRRLERRKLYLNSLQTVTKPRCPATLATSMVALNKR
LKKQRQSRKTSDFVPRINPGSSMDYLNRQPFTPLVKSSFTHPKPFHLHTS
ERALRRQVYDERKRIRMDRRLEQQTIDWFARERSEYFKLRKMTNFKATPN
PWKQTRVTARKDSQAAASFLDH

BO26055.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:40:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG5781-PA 266 CG5781-PA 1..266 1..266 1392 100 Plus
CG15395-PB 275 CG15395-PB 84..273 74..255 175 26.9 Plus