BO26076.complete Sequence
703 bp assembled on 2010-06-29
GenBank Submission: KX795660
> BO26076.complete
GAAGTTATCAGTCGACATGAGTAAAACGAGCTTAGCGACGCAGACCAATG
GCACGGCGGAAAATGGAAACTGTTTTGATATCCTCAAAGTGTCTAATTTG
TTCGAAACCAGCCTTCTGGACGAGGATGACGTACAATTAGACGCATACTT
GGCAGCCTACGAGGAAATAATGAAGTTCTTCCAGCTCATGGGCAGTGTCT
TCAGTTTTGTCAGCAGCGATGTGCGCAGTAAAATAGATATCTTATACGCC
CTGAGAGCCAAGGACGCGGAGGAGCAGGAACACTTTAATACCTTCAGAAC
CATGCTGGATTACGAGAAGGAGGCCCAGTTGCTTACTCAGAAGGGTTACG
TGTCTGGCAGTCGAACGCTGCTACGTCTTCATCGCGGTCTTGACTTTGTC
TACGAGTTTCTCAATCGGATCCAGGCGATACCCGACGACCAAAAGACTGT
GGACGTGTGCAAGGAGGCCTACGATGACACCCTGGGCAAGCATCACTCAT
TCCTCATCCGCAAAGGAGCGCGCCTGGCTATGTACGCGATGCCCACTAGG
GGAGATCTTCTCAAGAAAGTGTGCTCCGATGTCGAGGCGGCCAAAGAGAA
CCTGCCTTCCATGCTGAAGCATATGAGAACCAACTACGATCGCACAGAAG
ACCTCTACACGCTATACGATCTACACAGCCTGCCTGCAAGCTTTCTAGAC
CAT
BO26076.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:47:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30392-RB | 672 | CG30392-PB | 1..669 | 17..685 | 3345 | 100 | Plus |
| CG30392-RA | 672 | CG30392-PA | 1..669 | 17..685 | 3345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:47:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30392-RB | 1080 | CG30392-RB | 98..766 | 17..685 | 3345 | 100 | Plus |
| CG30392-RA | 1141 | CG30392-RA | 98..766 | 17..685 | 3345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:47:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21291289..21291586 | 685..388 | 1475 | 99.7 | Minus |
| 2R | 25286936 | 2R | 21291642..21291859 | 392..175 | 1090 | 100 | Minus |
| 2R | 25286936 | 2R | 21291925..21292084 | 176..17 | 800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:47:56 has no hits.
BO26076.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:44:41 Download gff for
BO26076.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30392-RA | 95..763 | 17..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:41 Download gff for
BO26076.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30392-RA | 98..766 | 17..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:49:22 Download gff for
BO26076.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30392-RA | 98..766 | 17..687 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:49:22 Download gff for
BO26076.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21291287..21291581 | 393..687 | 99 | <- | Minus |
| 2R | 21291642..21291859 | 175..392 | 100 | <- | Minus |
| 2R | 21291927..21292084 | 17..174 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:41 Download gff for
BO26076.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17178792..17179086 | 393..687 | 99 | <- | Minus |
| arm_2R | 17179147..17179364 | 175..392 | 100 | <- | Minus |
| arm_2R | 17179432..17179589 | 17..174 | 100 | | Minus |
BO26076.pep Sequence
Translation from 16 to 703
> BO26076.pep
MSKTSLATQTNGTAENGNCFDILKVSNLFETSLLDEDDVQLDAYLAAYEE
IMKFFQLMGSVFSFVSSDVRSKIDILYALRAKDAEEQEHFNTFRTMLDYE
KEAQLLTQKGYVSGSRTLLRLHRGLDFVYEFLNRIQAIPDDQKTVDVCKE
AYDDTLGKHHSFLIRKGARLAMYAMPTRGDLLKKVCSDVEAAKENLPSML
KHMRTNYDRTEDLYTLYDLHSLPASFLDH
BO26076.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:40:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30392-PB | 223 | CG30392-PB | 1..223 | 1..223 | 1145 | 100 | Plus |
| CG30392-PA | 223 | CG30392-PA | 1..223 | 1..223 | 1145 | 100 | Plus |
