Clone BO26110 Report

Search the DGRC for BO26110

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:261
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptCG1314-RA
Protein status:BO26110.pep: Imported from assembly
Sequenced Size:1168

Clone Sequence Records

BO26110.complete Sequence

1168 bp assembled on 2010-06-29

GenBank Submission: KX799327

> BO26110.complete
GAAGTTATCAGTCGACATGGAGAACAACAATTGCGAGGGCGAGCAACCAT
CGACATCCGGTGCATTCTGTAGGTGCTCCGAGTCTGGCATTGGTATATCT
GCCGTCCTGGATCTCGCTCAGTCGGAGTACTCCCTGGACACCACGCCGGA
AGCTGTGATGGCGAGTGCATGTCGTCTGGAGAACGAGAACGATGGTAATG
ATACCGATGAGGAGGTGGAGATCTGCTTCACCAGCTTGATGCCCGATCAC
CGTAGGCGCTTGTATATGGACTGCAAGCTGTCTCTTCCGGCGGGCGGAAG
AGTGCCCATGCGCGGCGGCGCAGAAGCCATTTCCGCTTCCCCACATGGCA
GAATCAGTTCTCCGGAAATTCGCTATGAGCGGCTGAGAAATACTGCAGTC
GAGGTGCGCAAATACTGGAGATTGCAGAAGCTGGACATGGCTTGTCCGCT
GAGCAATTGCGACTTGATGTTCAATCCTGAGCAGCTCCTAAGTCACTGCC
TGATGCACCACGAGCACATTATTACAATGGAAATGAAGCCCAAGGAGCCA
AAGGTTCTGAAGCTGTGTGGAAAATCCTTGCCCGAGGACAGGGGCAAAAG
CAACTGTGTGGGTCTGATGATCTACGAGAGTGGCAACAACGCGACCAGGA
ACTTAAATCTACCCAATATCTACAAGGACTGGGAGTGCCAATTGCCCGTC
CTGATAATGCTGTGGAAGACTTCCTGGGACTCGATGCCCGTCGGACCGCG
AGTGACCCATATCTATATTCTGTGGCTGTGCTGTCCCCAGGCCCAGACGC
CTTTGTTGGTATCCGTGAATATCGGAGAAAACACTCCGGGAGTGCCACGT
CGGCAGATGATTCAGACCTGTCAAGGCTCGGAGACCCTGAAGAATTGCGA
TCTGCTTTCGGACAGTCCGCATTTTATGCGATTCACACATCGCGAAATGA
AGGAGCACACTGAAGACTACACGCTGGACGTCGACCTACAGTTCACCATT
CTAGAGGATGAGGGTAGAGTGGGGCCCATATCGCCTAATCCTAATGAGGG
CACCTTTCGCGAAGACGACATCGAAATAGAACTTGCGGAAAAGGAGAATA
CCTCCAAGGAGGAGGTATTTATTGGGAACTCAGAAGGGCCGCAAGCGAAC
GCAAGCTTTCTAGACCAT

BO26110.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:33:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG1314-RA 1137 CG1314-PA 1..1134 17..1150 5655 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG1314-RA 1409 CG1314-RA 59..1192 17..1150 5655 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:33:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20868206..20869339 1150..17 5655 99.9 Minus
Blast to na_te.dros performed on 2014-11-26 14:33:21 has no hits.

BO26110.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:43 Download gff for BO26110.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 59..1192 17..1152 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:13 Download gff for BO26110.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 59..1192 17..1152 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:22 Download gff for BO26110.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 59..1192 17..1152 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:22 Download gff for BO26110.complete
Subject Subject Range Query Range Percent Splice Strand
X 20868204..20869339 17..1152 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:13 Download gff for BO26110.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20739231..20740366 17..1152 99   Minus

BO26110.pep Sequence

Translation from 16 to 1168

> BO26110.pep
MENNNCEGEQPSTSGAFCRCSESGIGISAVLDLAQSEYSLDTTPEAVMAS
ACRLENENDGNDTDEEVEICFTSLMPDHRRRLYMDCKLSLPAGGRVPMRG
GAEAISASPHGRISSPEIRYERLRNTAVEVRKYWRLQKLDMACPLSNCDL
MFNPEQLLSHCLMHHEHIITMEMKPKEPKVLKLCGKSLPEDRGKSNCVGL
MIYESGNNATRNLNLPNIYKDWECQLPVLIMLWKTSWDSMPVGPRVTHIY
ILWLCCPQAQTPLLVSVNIGENTPGVPRRQMIQTCQGSETLKNCDLLSDS
PHFMRFTHREMKEHTEDYTLDVDLQFTILEDEGRVGPISPNPNEGTFRED
DIEIELAEKENTSKEEVFIGNSEGPQANASFLDH

BO26110.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG1314-PA 378 CG1314-PA 1..378 1..378 2037 100 Plus