BO26113.complete Sequence
736 bp assembled on 2010-06-29
GenBank Submission: KX798717
> BO26113.complete
GAAGTTATCAGTCGACATGCAGCTTTTCACACGAGTTATCCTGTTGGCCG
TGACCATTTTCAGCGTCAGTGCCGTGCCGCGTTTTGGAGAAGATATTGGT
CTGGAGGAGGTCCTATTCCGCATGGTCCTTGGTGAGGCTGAGGGTCGAGG
TCTGACTCCTGCTGCCCAGACTTGTGCCAACATCTACCTGAACACCACCC
AGAAGAACGGCGATAAGTTGGCCAATGCCACCAATGCTTGCGAGGAGGCA
GCCAATCGCACCAATGTCGCCTACACCCAGACCAGCAACTCCACCATCAA
CCAGATCCGTCTCCAGTTGTTGACCCTGGAGCAGAACCTGCAGCTGTGCC
GCAACGAGACCGATTCGGCTATTTTCCTGAACTGCACTGTGTCCACTTTC
GACAAGAACCTCCAGCTGCTGGACACCTCCAACTCGCAGGCCTACCGTGC
TCAGTCCCAGTTCGTTTCCAATGCCACTCAGATGAATGCCGAGAAATCGA
ACTGCATCAGCTCCGCTGTTAGCGAGGCCAAGGTTCAGTCCATCCAGGCG
GCCAACGACTTTAATTCGTGTCTGGACAAGATCCCAGCCCAGCGTGAGGT
GCCACAAAAGATGGAGCAGCAGCTGAGAGAGCAGCAGCAGGAGAAGCCCA
CCCAGATAACCAAAGAGCAAGTGTCTGCGAAGCCACAGCTGATGTTCGAA
GATCTGCCTTTGACCAACGCAAGCTTTCTAGACCAT
BO26113.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:32:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5084-RB | 705 | CG5084-PB | 1..702 | 17..718 | 3510 | 100 | Plus |
CG5084-RA | 705 | CG5084-PA | 1..702 | 17..718 | 3510 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:32:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5084-RB | 1182 | CG5084-RB | 27..730 | 15..718 | 3520 | 100 | Plus |
CG5084-RA | 773 | CG5084-RA | 27..730 | 15..718 | 3520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:31:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18019046..18019378 | 65..397 | 1665 | 100 | Plus |
2R | 25286936 | 2R | 18019439..18019759 | 398..718 | 1605 | 100 | Plus |
2R | 25286936 | 2R | 18018691..18018746 | 15..70 | 265 | 98.2 | Plus |
Blast to na_te.dros performed 2014-11-26 14:31:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2387 | 602..670 | 110 | 65.7 | Plus |
BO26113.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:33 Download gff for
BO26113.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5084-RA | 52..753 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:36 Download gff for
BO26113.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5084-RA | 29..730 | 17..720 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:53 Download gff for
BO26113.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5084-RA | 29..730 | 17..720 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:53 Download gff for
BO26113.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18018693..18018740 | 17..64 | 100 | -> | Plus |
2R | 18019046..18019378 | 65..397 | 100 | -> | Plus |
2R | 18019439..18019759 | 398..720 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:36 Download gff for
BO26113.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13906198..13906245 | 17..64 | 100 | -> | Plus |
arm_2R | 13906551..13906883 | 65..397 | 100 | -> | Plus |
arm_2R | 13906944..13907264 | 398..720 | 99 | | Plus |
BO26113.pep Sequence
Translation from 16 to 736
> BO26113.pep
MQLFTRVILLAVTIFSVSAVPRFGEDIGLEEVLFRMVLGEAEGRGLTPAA
QTCANIYLNTTQKNGDKLANATNACEEAANRTNVAYTQTSNSTINQIRLQ
LLTLEQNLQLCRNETDSAIFLNCTVSTFDKNLQLLDTSNSQAYRAQSQFV
SNATQMNAEKSNCISSAVSEAKVQSIQAANDFNSCLDKIPAQREVPQKME
QQLREQQQEKPTQITKEQVSAKPQLMFEDLPLTNASFLDH
BO26113.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:32:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5084-PB | 234 | CG5084-PB | 1..234 | 1..234 | 1169 | 100 | Plus |
CG5084-PA | 234 | CG5084-PA | 1..234 | 1..234 | 1169 | 100 | Plus |