Clone BO26114 Report

Search the DGRC for BO26114

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:261
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG31178-RB
Protein status:BO26114.pep: Imported from assembly
Sequenced Size:685

Clone Sequence Records

BO26114.complete Sequence

685 bp assembled on 2010-07-09

GenBank Submission: KX794629

> BO26114.complete
GAAGTTATCAGTCGACATGTCTGGATCGAGGCGACGCCGTACCGTTATGG
GATACTACGAATACATAATGCCCGGGATTTATGAGTATCCTTTGATCCAA
TGTGATGCGAGTGCAATCCGTTCCTATAGTATTGACTCCATAATGACCAG
TGCTTCATCAACTTGGTCAATTCCAGATAGCAATGCCGCCTATGTAGCTG
GACCAATGGGCGTTATCCACTATCAATCGGATATGCAAACGCACTTGGCT
CTGCCAACTAGGCAAAATCTGGAAACTGGTCTTATATATCCAACCATTGA
ATCCAACTCATGTTTCCATGAGCCAAATCTAGAATATGTTCAAATGGAGA
ATGAGCACACCGATGACGACGAGGGATACGGCTATGAAATTCCCGAGATT
GTTCTCTGCTTAAACCGTTCAAATTCAGAGTCCGGCGCAGCTGAGGAATC
TGGCGATTCGCAGCGTTCGTCAAAGAGTTATTCATCGGTGGAGATTAGCG
AGCAGTCAAGATCGGGGGAATACGTTAAATTAGAATCGGTTTTCAGGAGG
CGAAGAAAAGTATCGCAGAAGCGCAAATATACCACCGAGCAGGGTTACCT
GGTTGAGGAACCCACCAGCGAACCATCTGAGGAGGATGCCGAGGAACAGG
CACCAAAATCCAGAAAAGCAAGCTTTCTAGACCAT

BO26114.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:54:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG31178-RB 654 CG31178-PB 1..651 17..667 3255 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG31178-RB 1184 CG31178-RB 421..1071 17..667 3255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:53:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21874159..21874809 17..667 3255 100 Plus
Blast to na_te.dros performed 2014-11-28 02:54:00
Subject Length Description Subject Range Query Range Score Percent Strand
HMS-Beagle2 7220 HMS-Beagle2 Beagle2 7220bp 4100..4161 342..398 109 69.4 Plus

BO26114.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-09 16:28:04 Download gff for BO26114.complete
Subject Subject Range Query Range Percent Splice Strand
CG31178-RB 421..1067 17..663 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:56 Download gff for BO26114.complete
Subject Subject Range Query Range Percent Splice Strand
CG31178-RB 421..1067 17..663 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:17 Download gff for BO26114.complete
Subject Subject Range Query Range Percent Splice Strand
CG31178-RB 421..1067 17..663 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:17 Download gff for BO26114.complete
Subject Subject Range Query Range Percent Splice Strand
3R 21874159..21874805 17..663 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:56 Download gff for BO26114.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 17699881..17700527 17..663 100   Plus

BO26114.pep Sequence

Translation from 16 to 685

> BO26114.pep
MSGSRRRRTVMGYYEYIMPGIYEYPLIQCDASAIRSYSIDSIMTSASSTW
SIPDSNAAYVAGPMGVIHYQSDMQTHLALPTRQNLETGLIYPTIESNSCF
HEPNLEYVQMENEHTDDDEGYGYEIPEIVLCLNRSNSESGAAEESGDSQR
SSKSYSSVEISEQSRSGEYVKLESVFRRRRKVSQKRKYTTEQGYLVEEPT
SEPSEEDAEEQAPKSRKASFLDH

BO26114.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:42:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG31178-PB 217 CG31178-PB 1..217 1..217 1123 100 Plus