BO26117.complete Sequence
784 bp assembled on 2010-07-09
GenBank Submission: KX794051
> BO26117.complete
GAAGTTATCAGTCGACATGAGAACTTCTTGTGTAATTTTTGTGGCCCTTC
TGTGCTGCTCCTTGGGCTCCGCCAAGCTCTTCGATGATGAGCTGCGCGAA
CTGACGGAGTTCCTGCGTTTGCAGATGCGATGTGGCTACCCGGCCAGAGG
GGTTCCCATTTTGGCCCCGGCTCAGATGGCCTACAAGGAAATTGGCATCA
GAACTGAGAACTTTGGTTGCAATGGAAACTTCACCGATCTGATTATCGAG
GGATTGGATGGGTACGAGTTCTCCAAGCTGGAGTGGAACAACATTTTGCA
TACCATTAAGTTCGACATGAACTTCCCCAAGATTTCCCTGAAGAGCACAA
ACTATAAACTAAATCTCCTGGCTCGTCTATTTGGTGCCGATTTCTCCCTG
TGGGGTGACGGTGCCCTCAGTCTGGAGTTGATCAATTTCCGAGCTTACGG
CAGTTTCGTTATTCGCCCAAAGTCGGCCACCAGTGGTGTGTACGCCAAGA
GCTGGAAGGTTAACTGGGAATTGGAGGAGGCTAAGTCCCAGACCACGGGC
TTTATGAACAGTCGTCTGTACACGAAGTTCATCAACGATCTGATCGTGGA
GTATCTCGATATCATGATCAATGACAACCCCACGGAAGTTTCCCAATTCA
TGGAGGAGCTCATTGTTCCGCCCATGAATTTGGTTCTGGATAATCTGGCC
TGGTATGAGATTACCGCTATCATTTTGGGCCTGGCCGAGGGAATTTTGCC
GGTGGAGCCAATTTGCGCAAGCTTTCTAGACCAT
BO26117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:54:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7968-RA | 753 | CG7968-PA | 1..750 | 17..766 | 3750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:54:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7968-RA | 867 | CG7968-RA | 19..768 | 17..766 | 3750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:54:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13849680..13850230 | 216..766 | 2755 | 100 | Plus |
| 2L | 23513712 | 2L | 13849418..13849617 | 17..216 | 1000 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:54:05 has no hits.
BO26117.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-09 16:28:05 Download gff for
BO26117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7968-RA | 7..756 | 17..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:58 Download gff for
BO26117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7968-RA | 19..768 | 17..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:38:20 Download gff for
BO26117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7968-RA | 19..768 | 17..768 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:38:20 Download gff for
BO26117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13849418..13849617 | 17..216 | 100 | -> | Plus |
| 2L | 13849681..13850230 | 217..768 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:58 Download gff for
BO26117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13849418..13849617 | 17..216 | 100 | -> | Plus |
| arm_2L | 13849681..13850230 | 217..768 | 99 | | Plus |
BO26117.pep Sequence
Translation from 16 to 784
> BO26117.pep
MRTSCVIFVALLCCSLGSAKLFDDELRELTEFLRLQMRCGYPARGVPILA
PAQMAYKEIGIRTENFGCNGNFTDLIIEGLDGYEFSKLEWNNILHTIKFD
MNFPKISLKSTNYKLNLLARLFGADFSLWGDGALSLELINFRAYGSFVIR
PKSATSGVYAKSWKVNWELEEAKSQTTGFMNSRLYTKFINDLIVEYLDIM
INDNPTEVSQFMEELIVPPMNLVLDNLAWYEITAIILGLAEGILPVEPIC
ASFLDH
BO26117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:10:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7968-PA | 250 | CG7968-PA | 1..250 | 1..250 | 1307 | 100 | Plus |
| CG7953-PB | 297 | CG7953-PB | 58..285 | 25..249 | 221 | 27.2 | Plus |
| CG7953-PA | 297 | CG7953-PA | 58..285 | 25..249 | 221 | 27.2 | Plus |
| CG8997-PB | 260 | CG8997-PB | 3..247 | 7..242 | 209 | 23.2 | Plus |
| CG8997-PA | 260 | CG8997-PA | 3..247 | 7..242 | 209 | 23.2 | Plus |
