Clone BO26120 Report

Search the DGRC for BO26120

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:261
Well:20
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO26120.pep: Imported from assembly
Sequenced Size:670

Clone Sequence Records

BO26120.complete Sequence

670 bp assembled on 2010-06-29

> BO26120.complete
GAAGTTATCAGTCGACATGGGAGGGGGGCGAAAACTGAGCAGGCCGTGCT
GGTCCTCGCATCCTGCCCCTGAGTTAAAAATGCGGAACTACTGGAAAAAC
CTTTGGCGAGTACTGGACTCCCTTACTGACCCACCTAAAAGATCGGAGGA
CAAAGTTCTCCAGAGCGATTACACAAGTCGTTTAAGCCTGGTGACCCATT
TAAGTCTGCAAAGCGAACGACGAGCTCCCCGATTTGTGATTCCATCTACA
CGGCGCCATGTGACTTTTTCGCCCAGCACTTTGGAACACGTGGAAATCCG
AATGGCGGTACAGCAGGCGGAAACATCGGCCTTCCAGAATTTCGTGCGTG
AAATGTACGATGGCTATTACCAACTATTACTCTCACAGGAGAGAGAGCTA
ACCGGCTTTCAGCCAGAACAACAGTTGGCCAATCGAAGGCTGGGAATGAA
GGACCTCGGGAGACTCCAGAAAGTGGCCACTGACATGTGGAATCGAATGG
ACAGGGACCGAAAACAACAGTACAAGGATCTGGCCATGATGGCACTGCAT
CGCCGAAGCCTACGTCTGCCCCCCGATCCTCATCGCATACCCCCACACCT
CAAAAGATCATCCAAAAAAGTGACTAAATATAGATCAACTTGCTTATATC
CCGCAAGCTTTCTAGACCAT

BO26120.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:31:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG34269-RA 576 CG34269-PA 1..573 80..652 2760 98.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:31:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG34269-RA 660 CG34269-RA 26..655 23..652 3030 98.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:31:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 528362..528991 23..652 3030 98.7 Plus
Blast to na_te.dros performed on 2014-11-26 14:31:26 has no hits.

BO26120.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:27 Download gff for BO26120.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 17..653 17..654 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:22 Download gff for BO26120.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 17..653 17..654 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:42 Download gff for BO26120.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 19..655 17..654 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:42 Download gff for BO26120.complete
Subject Subject Range Query Range Percent Splice Strand
3L 528355..528991 17..654 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:22 Download gff for BO26120.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 528355..528991 17..654 98   Plus

BO26120.pep Sequence

Translation from 16 to 670

> BO26120.pep
MGGGRKLSRPCWSSHPAPELKMRNYWKNLWRVLDSLTDPPKRSEDKVLQS
DYTSRLSLVTHLSLQSERRAPRFVIPSTRRHVTFSPSTLEHVEIRMAVQQ
AETSAFQNFVREMYDGYYQLLLSQERELTGFQPEQQLANRRLGMKDLGRL
QKVATDMWNRMDRDRKQQYKDLAMMALHRRSLRLPPDPHRIPPHLKRSSK
KVTKYRSTCLYPASFLDH

BO26120.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG34269-PA 191 CG34269-PA 1..191 22..212 1000 100 Plus