Clone BO26123 Report

Search the DGRC for BO26123

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:261
Well:23
Vector:pDNR-Dual
Associated Gene/TranscriptCG14985-RB
Protein status:BO26123.pep: Imported from assembly
Sequenced Size:757

Clone Sequence Records

BO26123.complete Sequence

757 bp assembled on 2010-06-29

GenBank Submission: KX795819

> BO26123.complete
GAAGTTATCAGTCGACATGAGCAGCGCTTTGAACGCCAAGGAGTTACTTA
TACGCGCCGTGGAATGCGACCAAGTTGGACGGATCTTGGAGGCGCAAACG
CTGTACACAGAGGGGATCGGGCAGTTGATGCAGTTCGTCAACGGGGAACC
GGATGAAGCCAAACGGAAGGGGTTCCTGACCAGGATCAAGGAGTACATGG
ATCGGGCTGACGCAATTAAGGCGCGGATCAATGGCAAACTAATGCTCGGC
GAGGTGGTTTCCCACGTTTCCATCGACGAGAATGATACGGGCTTCGACTA
CGATCAGCTCTTCGGGAAATACATGGACGACAAGACCGTCGAGATCATGC
TGGAGGAACCCTACATGACGCAGAACTATCAGTATCAAAATCTAATAAGA
TTCTTGGAGCTAGCTGCCACAAATTGCCCAAACCTAAAGTATTTTCGACT
GATCACCAAAGAGTACAAGGATGCAAAGAATCCAGATCAGCAGGAAACAA
ATCTTGGACAGATCAAGGGTGACTTGGAGCGGCGGAACGTGACTGTCTAC
ATAAAATACGAAGACTCTCTGCACGATCGAAAAATTTACTTAAGCAATGG
CTATATAATTAAGATTGGGCGAGGTCTGCACTTCTACAAGCCCGCCAATC
CGATGTATTCCATTGGCCTGGTCAACTACAAATTCCGAAAATGCCTCCAA
ACGGATGTGGATATATGGCGCAACTCAAGCGCTGCATCGGCAAGCTTTCT
AGACCAT

BO26123.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:32:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-RB 726 CG14985-PB 1..723 17..739 3600 99.9 Plus
CG14985-RC 573 CG14985-PC 1..572 17..588 2860 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:32:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-RB 2808 CG14985-RB 126..848 17..739 3600 99.9 Plus
CG14985-RC 1859 CG14985-RC 126..701 17..592 2865 99.8 Plus
CG14985-RC 1859 CG14985-RC 798..948 589..739 740 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:32:08
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4003599..4003964 17..382 1830 100 Plus
3L 28110227 3L 4004133..4004341 380..588 1045 100 Plus
3L 28110227 3L 4004516..4004666 589..739 740 99.3 Plus
Blast to na_te.dros performed on 2014-11-26 14:32:09 has no hits.

BO26123.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:34 Download gff for BO26123.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 128..850 17..741 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:41 Download gff for BO26123.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 126..848 17..741 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:56 Download gff for BO26123.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 126..848 17..741 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:56 Download gff for BO26123.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4003599..4003964 17..382 100 -> Plus
3L 4004136..4004341 383..588 100 -> Plus
3L 4004516..4004666 589..741 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:41 Download gff for BO26123.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4004516..4004666 589..741 98   Plus
arm_3L 4003599..4003964 17..382 100 -> Plus
arm_3L 4004136..4004341 383..588 100 -> Plus

BO26123.pep Sequence

Translation from 16 to 757

> BO26123.pep
MSSALNAKELLIRAVECDQVGRILEAQTLYTEGIGQLMQFVNGEPDEAKR
KGFLTRIKEYMDRADAIKARINGKLMLGEVVSHVSIDENDTGFDYDQLFG
KYMDDKTVEIMLEEPYMTQNYQYQNLIRFLELAATNCPNLKYFRLITKEY
KDAKNPDQQETNLGQIKGDLERRNVTVYIKYEDSLHDRKIYLSNGYIIKI
GRGLHFYKPANPMYSIGLVNYKFRKCLQTDVDIWRNSSAASASFLDH

BO26123.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-PB 241 CG14985-PB 1..241 1..241 1255 100 Plus
CG14985-PC 190 CG14985-PC 1..190 1..190 980 100 Plus
CG30398-PA 267 CG30398-PA 19..241 9..235 470 41.4 Plus