BO26123.complete Sequence
757 bp assembled on 2010-06-29
GenBank Submission: KX795819
> BO26123.complete
GAAGTTATCAGTCGACATGAGCAGCGCTTTGAACGCCAAGGAGTTACTTA
TACGCGCCGTGGAATGCGACCAAGTTGGACGGATCTTGGAGGCGCAAACG
CTGTACACAGAGGGGATCGGGCAGTTGATGCAGTTCGTCAACGGGGAACC
GGATGAAGCCAAACGGAAGGGGTTCCTGACCAGGATCAAGGAGTACATGG
ATCGGGCTGACGCAATTAAGGCGCGGATCAATGGCAAACTAATGCTCGGC
GAGGTGGTTTCCCACGTTTCCATCGACGAGAATGATACGGGCTTCGACTA
CGATCAGCTCTTCGGGAAATACATGGACGACAAGACCGTCGAGATCATGC
TGGAGGAACCCTACATGACGCAGAACTATCAGTATCAAAATCTAATAAGA
TTCTTGGAGCTAGCTGCCACAAATTGCCCAAACCTAAAGTATTTTCGACT
GATCACCAAAGAGTACAAGGATGCAAAGAATCCAGATCAGCAGGAAACAA
ATCTTGGACAGATCAAGGGTGACTTGGAGCGGCGGAACGTGACTGTCTAC
ATAAAATACGAAGACTCTCTGCACGATCGAAAAATTTACTTAAGCAATGG
CTATATAATTAAGATTGGGCGAGGTCTGCACTTCTACAAGCCCGCCAATC
CGATGTATTCCATTGGCCTGGTCAACTACAAATTCCGAAAATGCCTCCAA
ACGGATGTGGATATATGGCGCAACTCAAGCGCTGCATCGGCAAGCTTTCT
AGACCAT
BO26123.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:32:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14985-RB | 726 | CG14985-PB | 1..723 | 17..739 | 3600 | 99.9 | Plus |
CG14985-RC | 573 | CG14985-PC | 1..572 | 17..588 | 2860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:32:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14985-RB | 2808 | CG14985-RB | 126..848 | 17..739 | 3600 | 99.9 | Plus |
CG14985-RC | 1859 | CG14985-RC | 126..701 | 17..592 | 2865 | 99.8 | Plus |
CG14985-RC | 1859 | CG14985-RC | 798..948 | 589..739 | 740 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:32:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 4003599..4003964 | 17..382 | 1830 | 100 | Plus |
3L | 28110227 | 3L | 4004133..4004341 | 380..588 | 1045 | 100 | Plus |
3L | 28110227 | 3L | 4004516..4004666 | 589..739 | 740 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:32:09 has no hits.
BO26123.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:34 Download gff for
BO26123.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14985-RB | 128..850 | 17..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:41 Download gff for
BO26123.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14985-RB | 126..848 | 17..741 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:56 Download gff for
BO26123.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14985-RB | 126..848 | 17..741 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:56 Download gff for
BO26123.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 4003599..4003964 | 17..382 | 100 | -> | Plus |
3L | 4004136..4004341 | 383..588 | 100 | -> | Plus |
3L | 4004516..4004666 | 589..741 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:41 Download gff for
BO26123.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 4004516..4004666 | 589..741 | 98 | | Plus |
arm_3L | 4003599..4003964 | 17..382 | 100 | -> | Plus |
arm_3L | 4004136..4004341 | 383..588 | 100 | -> | Plus |
BO26123.pep Sequence
Translation from 16 to 757
> BO26123.pep
MSSALNAKELLIRAVECDQVGRILEAQTLYTEGIGQLMQFVNGEPDEAKR
KGFLTRIKEYMDRADAIKARINGKLMLGEVVSHVSIDENDTGFDYDQLFG
KYMDDKTVEIMLEEPYMTQNYQYQNLIRFLELAATNCPNLKYFRLITKEY
KDAKNPDQQETNLGQIKGDLERRNVTVYIKYEDSLHDRKIYLSNGYIIKI
GRGLHFYKPANPMYSIGLVNYKFRKCLQTDVDIWRNSSAASASFLDH
BO26123.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:32:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14985-PB | 241 | CG14985-PB | 1..241 | 1..241 | 1255 | 100 | Plus |
CG14985-PC | 190 | CG14985-PC | 1..190 | 1..190 | 980 | 100 | Plus |
CG30398-PA | 267 | CG30398-PA | 19..241 | 9..235 | 470 | 41.4 | Plus |