BO26124.complete Sequence
2302 bp assembled on 2010-07-15
GenBank Submission: KX799954
> BO26124.complete
GAAGTTATCAGTCGACATGACCACGCAGAACACCACGCCGGCAGGATTCA
CCGGAAATCGAAACCGCTACTACAACCCCGTCTCAAAGATCCAGTCGCTC
ATTCACAACCTGGACGCGGAGCTGGTGCAGCTGTGCAAGCAGTGCTCCGT
GCAGAAGCCGCTGACTAGCCTCAATAACAGCACCAGCCTTGGCAGCCACT
TCTCGAATTTCGGAGCGCTTGGTGGTGGCAGTGGGTCCAAAACCATGGGC
GGCAGCAGCAGCATGGGTAGCAACAACTTCTCTCCCGACAGCATTGGCAA
TCTTTTGGCCCGTGTCCGTGCATCAACTCCGTTGCCCAGGACCGTGACCA
GCTCGCCCACGGCGCCGGAAGCACAAAAGCGTCAGATGCGCAATGTCTAC
CGCACCCGTGTGATCGATGCGTACCGTAATCGGCGGATCTTCACCGTATA
CGGCAACTACCACACGGTTAGACGGGCTCTAATGCGAAGGGGCTGGCTGG
AGAAACTGCCGGCCTCGCGGCATGCCAAGCTGCAGAGCATGTCCGAGGAT
GCCCTGCTGGAGCACGCCCGGCGGGGCAACGACTACGAGGCGGTGGTCAT
ATCCAAGATGATCAACCATTTCCCAGCCTTCTTCATCTGGCAGGGCAAGG
GGCAGCGCGACCTATGCGCCGAGGTAAGACCCTTCCGGAATCGTGTGCGC
CGCAGCCAGTTCCTGGACTTCTCCACCAAGGTGGGTCTGGTGGGCTGCGC
CGAACAGGAGCGCTGGTATCGCGAGGACGGTGTCTGCGGCATGAGCTATC
CGCGCTTCTATCGCCTGGGCGGTAACAATCTGGAGGAGCGTATGGCCTTC
ATAGAGGACTACCAGCAGACGCAGGCCCGCTCCCTGCTGCTCTATGTAAG
GGAGCACCAGCCGGCAGAGCTGATCAGCGAGAACGGCACCATATTCAGCA
CCACTCTGGACTTTGCGCTCGGCAAGGTCAAGAAGATGGTGCGCCACGCG
GAGCACTACTCCTTGGACGATGCTCGCATCAAGCCGCCGACTCCGGCGGA
GATCGTTGAGAATCAGACCTTTATGGTGCAGTCCACCGATGTGCTCAAGT
CCAATGCTAAGTTCAAGGTCAGCGAGAAGGTGATGGCAGAGTACGCCCGT
CTAGCGGGCCTGTATCTCGACCAGATCGAGTCCCTTCGTCCGGACTACCG
TTGGGATGGCAGCCGCAACCTGTGGATTCTCAAGCCCGGATACCAGTCGC
GCGGCATCGGCATTGTAATCCGCAGCTCCCTGGACGACATTCTGCAGTGG
ACCTCCAACAATCAGAACAAGAAATACATTGTCCAGAAGTACATAGAGCG
ACCCCTGCTGATTTACCGCACCAAGTTCGACATCCGGCAGTACATGCTGC
TGACCATCACGGACACTAAGGTGAGCATATGGACGTATCGCGACTGCTAC
CTGCGCTTCAGCTCGCAGGAGTTCACCATGGACGATCTGCGGGAGTCCAT
CCACCTGACCAATAATTCGGTGCAGAAGCGGTACAAGAACAAGACCAACC
GGGATTCGCGGCTGCCCAAGAATAACATGTGGTCACTGGATCAGTTCAAG
AACTACCTACGCATAATGGGTGCTCCGGACGGATCGTGGTCGAAGACGTA
CAACGGATTCAAGCAGAACCTGGTGGCTGTGGTGATGGCCAGTCTGGACG
AGACGGAGTTGTTGCAGAACGCCTTCGAGCTGTACGGTTGCGACTTCATG
CTCGACGAGCACTACAATCCCATTCTGATCGAGATCAACTCGACGCCGGA
TTTGTCGCCATCCACGGAGATCACGGCCAGGATATGTCCGATGGTTCTGA
AGGATTGCATCCGCGTGGTGGTGGATCTGCCCAAGAACCCCACCGCTGCC
ACCGGACTCTTCGAGCTCGCCTTCGAGGTGAACTACAGCATAAACAAGGG
AGCGGATGGCAAGCCGCTGGAACTGAATGGCAAACAGATGACCCTGTTCG
AAAATATGCCCAGAATGCGGAACAGCCCCAGGACGCGGCTCCTGCGCAAG
ATTCTGAACAATGTGAAGACATCAACTACCAAGAAGGTCGAAAAGGTCGT
GGAGGCTCCAGCTAAAAATGTGAAGAATCCCACTGCCAAGATCACCAAGA
AAAAGAAACTATCTGCGTCAGCTGGAAGCTCGACGGCAGCCTCGGCTCAG
CCATCAACGCAGAATTTGACAACCAAGTTGATACTAAATCCAGCAACTCG
GGAAAATCTTGCACTGCAATATACTGCTCCAAAGGCAAGCTTTCTAGACC
AT
BO26124.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:05:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TTLL3B-RB | 2271 | CG11201-PB | 1..2268 | 17..2284 | 11340 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:05:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TTLL3B-RB | 3017 | CG11201-RB | 384..2651 | 17..2284 | 11340 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:05:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6733249..6734578 | 17..1346 | 6650 | 100 | Plus |
| 2L | 23513712 | 2L | 6734649..6735459 | 1345..2155 | 4055 | 100 | Plus |
| 2L | 23513712 | 2L | 6735542..6735672 | 2154..2284 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:05:49 has no hits.
BO26124.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 10:01:18 Download gff for
BO26124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11201-RB | 384..2651 | 17..2286 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:06:19 Download gff for
BO26124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TTLL3B-RB | 384..2651 | 17..2286 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:43:50 Download gff for
BO26124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| TTLL3B-RB | 384..2651 | 17..2286 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:43:50 Download gff for
BO26124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6733249..6734578 | 17..1346 | 100 | -> | Plus |
| 2L | 6734651..6735459 | 1347..2155 | 100 | -> | Plus |
| 2L | 6735544..6735672 | 2156..2286 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:06:19 Download gff for
BO26124.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6735544..6735672 | 2156..2286 | 98 | | Plus |
| arm_2L | 6733249..6734578 | 17..1346 | 100 | -> | Plus |
| arm_2L | 6734651..6735459 | 1347..2155 | 100 | -> | Plus |
BO26124.pep Sequence
Translation from 16 to 2302
> BO26124.pep
MTTQNTTPAGFTGNRNRYYNPVSKIQSLIHNLDAELVQLCKQCSVQKPLT
SLNNSTSLGSHFSNFGALGGGSGSKTMGGSSSMGSNNFSPDSIGNLLARV
RASTPLPRTVTSSPTAPEAQKRQMRNVYRTRVIDAYRNRRIFTVYGNYHT
VRRALMRRGWLEKLPASRHAKLQSMSEDALLEHARRGNDYEAVVISKMIN
HFPAFFIWQGKGQRDLCAEVRPFRNRVRRSQFLDFSTKVGLVGCAEQERW
YREDGVCGMSYPRFYRLGGNNLEERMAFIEDYQQTQARSLLLYVREHQPA
ELISENGTIFSTTLDFALGKVKKMVRHAEHYSLDDARIKPPTPAEIVENQ
TFMVQSTDVLKSNAKFKVSEKVMAEYARLAGLYLDQIESLRPDYRWDGSR
NLWILKPGYQSRGIGIVIRSSLDDILQWTSNNQNKKYIVQKYIERPLLIY
RTKFDIRQYMLLTITDTKVSIWTYRDCYLRFSSQEFTMDDLRESIHLTNN
SVQKRYKNKTNRDSRLPKNNMWSLDQFKNYLRIMGAPDGSWSKTYNGFKQ
NLVAVVMASLDETELLQNAFELYGCDFMLDEHYNPILIEINSTPDLSPST
EITARICPMVLKDCIRVVVDLPKNPTAATGLFELAFEVNYSINKGADGKP
LELNGKQMTLFENMPRMRNSPRTRLLRKILNNVKTSTTKKVEKVVEAPAK
NVKNPTAKITKKKKLSASAGSSTAASAQPSTQNLTTKLILNPATRENLAL
QYTAPKASFLDH
BO26124.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:33:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TTLL3B-PB | 756 | CG11201-PB | 1..756 | 1..756 | 3924 | 100 | Plus |
| TTLL3A-PA | 992 | CG11323-PA | 129..673 | 126..658 | 738 | 32.9 | Plus |
| CG3964-PA | 982 | CG3964-PA | 551..765 | 385..596 | 245 | 33.3 | Plus |
| CG3964-PC | 989 | CG3964-PC | 551..765 | 385..596 | 245 | 33.3 | Plus |
| CG3964-PB | 989 | CG3964-PB | 551..765 | 385..596 | 245 | 33.3 | Plus |
