Clone BO26138 Report

Search the DGRC for BO26138

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:261
Well:38
Vector:pDNR-Dual
Associated Gene/Transcriptbol-RE
Protein status:BO26138.pep: Imported from assembly
Sequenced Size:319

Clone Sequence Records

BO26138.complete Sequence

319 bp assembled on 2010-06-29

GenBank Submission: KX795833

> BO26138.complete
GAAGTTATCAGTCGACATGCACAAAATAGCAGCAGCGCCGCCTCCATCGG
CAACGCCCGGCGGAGGACTGGAGACGCCCCTGGCGGCGCCAAAATACGGC
ACACTAATACCCAATCGCATCTTTGTGGGTGGCATCAGCGGCGATACCAC
CGAGGCTGATCTAACCCGCGTCTTCAGCGCCTATGGCACGGTAAAGAGCA
CCAAAATCATCGTGGATCGAGCAGGTGTGAGCAAGGGCTACGGATTCGTC
ACCTTCGAGACGGAGCAGGAGGCGCAAAGACTGCAAGCGGATGGCATTAC
CGCAAGCTTTCTAGACCAT

BO26138.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:30:47
Subject Length Description Subject Range Query Range Score Percent Strand
bol-RE 288 CG4760-PE 1..285 17..301 1425 100 Plus
bol-RF 702 CG4760-PF 1..278 17..294 1390 100 Plus
bol-RG 687 CG4760-PG 1..278 17..294 1390 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:30:48
Subject Length Description Subject Range Query Range Score Percent Strand
bol-RE 2023 CG4760-RE 629..913 17..301 1425 100 Plus
bol-RF 6538 CG4760-RF 780..1057 17..294 1390 100 Plus
bol-RG 2930 CG4760-RG 1199..1476 17..294 1390 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:30:46
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9112633..9112789 293..137 785 100 Minus
3L 28110227 3L 9113046..9113167 138..17 610 100 Minus
Blast to na_te.dros performed on 2014-11-26 14:30:46 has no hits.

BO26138.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:21 Download gff for BO26138.complete
Subject Subject Range Query Range Percent Splice Strand
bol-RE 595..879 17..303 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:09 Download gff for BO26138.complete
Subject Subject Range Query Range Percent Splice Strand
bol-RE 629..913 17..303 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:27 Download gff for BO26138.complete
Subject Subject Range Query Range Percent Splice Strand
bol-RE 629..913 17..303 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:27 Download gff for BO26138.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9112627..9112787 139..299 98 <- Minus
3L 9113046..9113167 17..138 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:09 Download gff for BO26138.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9105727..9105887 139..299 98 <- Minus
arm_3L 9106146..9106267 17..138 100   Minus

BO26138.pep Sequence

Translation from 16 to 319

> BO26138.pep
MHKIAAAPPPSATPGGGLETPLAAPKYGTLIPNRIFVGGISGDTTEADLT
RVFSAYGTVKSTKIIVDRAGVSKGYGFVTFETEQEAQRLQADGITASFLD
H

BO26138.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
bol-PE 95 CG4760-PE 1..95 1..95 485 100 Plus
bol-PA 189 CG4760-PA 1..93 1..93 476 100 Plus
bol-PC 189 CG4760-PC 1..93 1..93 476 100 Plus
bol-PG 228 CG4760-PG 1..93 1..93 476 100 Plus
bol-PD 228 CG4760-PD 1..93 1..93 476 100 Plus