BO26140.complete Sequence
469 bp assembled on 2010-06-29
GenBank Submission: KX797329
> BO26140.complete
GAAGTTATCAGTCGACATGTCAGAAGAAGAAGCCCCAGGATCTCCGGGTG
AGGCTGTTGAAGAAGAAGATACCACTACATCCGATGCTGATACAACCACA
GCTGGTGCCCGCATGATGATGATCCACCCATGGCTGACGGCCGCCGCAGT
GGCCATGTATGCCACCAAGGTCATGTGGGTCAAGTTCCGTGAGATCGGCC
TGGCTAAACAGGAAAAACGGCTCAAAAATCAACTGGCGAAGCAGTCTAAG
CCCTTGCAGACTATTGATGAAGATGTTTCCGAATCTGATGCAGAATATGA
TGCAGAATCTGATGCAGAATCTGATGCAGAATCAGATGCAGAGGACGAAG
ACGTCGTCGGGCCCCAAGTCGAAGATGCAGCAGAGGGACCGGGATTCGAG
CCAAACCGTGTGGATATATGCCATCGCCCGATCGAAGTCTCTACTGACTG
CGCAAGCTTTCTAGACCAT
BO26140.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:30:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12699-RB | 438 | CG12699-PB | 1..435 | 17..451 | 2175 | 100 | Plus |
| CG18469-RA | 387 | CG18469-PA | 100..204 | 107..211 | 225 | 81 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:30:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12699-RB | 766 | CG12699-RB | 74..508 | 17..451 | 2175 | 100 | Plus |
| CG18469-RA | 509 | CG18469-RA | 108..212 | 107..211 | 225 | 81 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:30:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17246788..17247222 | 451..17 | 2175 | 100 | Minus |
| 2R | 25286936 | 2R | 17246066..17246170 | 211..107 | 225 | 81 | Minus |
Blast to na_te.dros performed 2014-11-26 14:30:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib2 | 2844 | transib2 TRANSIB2 2844bp | 2535..2571 | 312..276 | 104 | 75.7 | Minus |
BO26140.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:20 Download gff for
BO26140.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12699-RA | 78..512 | 17..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:36:05 Download gff for
BO26140.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12699-RB | 74..508 | 17..453 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:23 Download gff for
BO26140.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12699-RB | 74..508 | 17..453 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:23 Download gff for
BO26140.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17246785..17247222 | 17..453 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:36:05 Download gff for
BO26140.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13134290..13134727 | 17..453 | 99 | | Minus |
BO26140.pep Sequence
Translation from 16 to 469
> BO26140.pep
MSEEEAPGSPGEAVEEEDTTTSDADTTTAGARMMMIHPWLTAAAVAMYAT
KVMWVKFREIGLAKQEKRLKNQLAKQSKPLQTIDEDVSESDAEYDAESDA
ESDAESDAEDEDVVGPQVEDAAEGPGFEPNRVDICHRPIEVSTDCASFLD
H
BO26140.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:35:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12699-PB | 145 | CG12699-PB | 1..145 | 1..145 | 748 | 100 | Plus |
| CG18469-PA | 128 | CG18469-PA | 1..116 | 1..119 | 229 | 45.9 | Plus |
