Clone BO26150 Report

Search the DGRC for BO26150

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:261
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptAldh-III-RJ
Protein status:BO26150.pep: Imported from assembly
Sequenced Size:1045

Clone Sequence Records

BO26150.complete Sequence

1045 bp assembled on 2010-07-07

GenBank Submission: KX795719

> BO26150.complete
GAAGTTATCAGTCGACATGTTTGACAACGCGATTAAACCTCATCCGGAGG
CCAATGGAGCTCCAATAAATGCAGGAGATCGGCCGATAACTACTGTCATT
AATATTGAACCAGAACCAGAAACCGAAAGTCCAATTGGGATCTTCACATC
ACAACCGGAAAGTCAACAACAACAACCCGAGCAGCTCCAATCCGAATCCG
AGTCCGACAGAATGGCCAATTTTGACGATACGTTGCAACGCGCCCGCCTT
GCCTTTTCCAGTGGAAAGACCAGGAATGTCAGCTTTCGACGCAAGCAGCT
GGAGAATTTGCTGCGTTGCTATGAGGAGCACGAGAACGAGATCATCAGCG
CCTTGGAGGCGGATCTGCGACGTCCCAAGCAGGAGAGCCTCATCGTGGAA
ACGGAATTCATGAAGAACGACATCAGGCACATCCTATTCCAGCTCGACGA
GTGGGTGCAGTCGGAGAAGCCGCCCAAGTCGTTTGTGAACATGATGGACG
ACGTCCAGATCTACAATGACCCCTTCGGAGTGGTTCTGGTGATCGGCGCC
TGGAACTACCCGCTGCAGCTGCTGCTCGTGCCAGTGGCTTCCGCCATCGC
CGCCGGAAACTGTGTGGTGATCAAGCCCAGCGAGATTGCCGCCAACTGCG
CCAAGTTCATTGCCGATGTCATTCCAAAATATTTGGATAATGATTGCTAT
CCAGTTGTCTGCGGTGGACCCAGCGAAACGGCGGAGCTGCTCAACCAGCG
TTTCGACTACATCTTCTACACGGGCTCCACGCGCGTAGGCAAGATTATCC
ACGCCGCGGCCAACAAGTACTTGACCCCCACCACCTTGGAGCTGGGTGGC
AAAAGCCCCTGCTACATTGACAAATCTGTGGACATGCGCACTGCGGTCAA
GCGCATCCTGTGGGGCAAGCTGATTAACTGCGGACAGACCTGCATCGCTC
CGGACTACATCCTCTGCTCCAAGGAGGTAACTACGATGCCAGCGAGCGTT
TCATCGAACCCACCATCTTGGTGGACGGCAAGCTTTCTAGACCAT

BO26150.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:39:01
Subject Length Description Subject Range Query Range Score Percent Strand
Aldh-III-RO 1692 CG11140-PO 1..962 17..978 4810 100 Plus
Aldh-III-RN 1692 CG11140-PN 1..962 17..978 4810 100 Plus
Aldh-III-RQ 1695 CG11140-PQ 1..965 17..978 4745 99.7 Plus
Aldh-III-RO 1692 CG11140-PO 1111..1165 973..1027 275 100 Plus
Aldh-III-RN 1692 CG11140-PN 1111..1165 973..1027 275 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:39:03
Subject Length Description Subject Range Query Range Score Percent Strand
Aldh-III-RO 2448 CG11140-RO 340..1301 17..978 4810 100 Plus
Aldh-III-RN 2352 CG11140-RN 244..1205 17..978 4810 100 Plus
Aldh-III-RQ 2923 CG11140-RQ 982..1946 17..978 4745 99.7 Plus
Aldh-III-RO 2448 CG11140-RO 1450..1504 973..1027 275 100 Plus
Aldh-III-RN 2352 CG11140-RN 1354..1408 973..1027 275 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:38:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7470393..7470617 692..468 1125 100 Minus
2R 25286936 2R 7470702..7470883 469..288 910 100 Minus
2R 25286936 2R 7469909..7470072 855..692 820 100 Minus
2R 25286936 2R 7469723..7469847 978..854 625 100 Minus
2R 25286936 2R 7473722..7473844 229..107 615 100 Minus
2R 25286936 2R 7473288..7473346 288..230 295 100 Minus
2R 25286936 2R 7469463..7469517 1027..973 275 100 Minus
2R 25286936 2R 7475440..7475494 71..17 275 100 Minus
2R 25286936 2R 7475342..7475378 107..71 185 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:39:00 has no hits.

BO26150.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-07 10:18:40 Download gff for BO26150.complete
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RJ 988..1992 23..1029 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:24:13 Download gff for BO26150.complete
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RN 250..1203 23..976 100 -> Plus
Aldh-III-RN 1358..1408 977..1029 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:33:24 Download gff for BO26150.complete
Subject Subject Range Query Range Percent Splice Strand
Aldh-III-RN 250..1203 23..976 100 -> Plus
Aldh-III-RN 1358..1408 977..1029 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:33:24 Download gff for BO26150.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7469460..7469513 977..1029 96 <- Minus
2R 7469725..7469845 856..976 100 <- Minus
2R 7469909..7470072 692..855 100 <- Minus
2R 7470394..7470615 470..691 100 <- Minus
2R 7470702..7470882 289..469 100 <- Minus
2R 7473288..7473346 230..288 100 <- Minus
2R 7473722..7473843 108..229 100 <- Minus
2R 7475342..7475377 72..107 100 <- Minus
2R 7475440..7475488 23..71 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:24:13 Download gff for BO26150.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3356965..3357018 977..1029 96 <- Minus
arm_2R 3357230..3357350 856..976 100 <- Minus
arm_2R 3357414..3357577 692..855 100 <- Minus
arm_2R 3357899..3358120 470..691 100 <- Minus
arm_2R 3358207..3358387 289..469 100 <- Minus
arm_2R 3360793..3360851 230..288 100 <- Minus
arm_2R 3361227..3361348 108..229 100 <- Minus
arm_2R 3362847..3362882 72..107 100 <- Minus
arm_2R 3362945..3362993 23..71 100   Minus

BO26150.pep Sequence

Translation from 16 to 1045

> BO26150.pep
MFDNAIKPHPEANGAPINAGDRPITTVINIEPEPETESPIGIFTSQPESQ
QQQPEQLQSESESDRMANFDDTLQRARLAFSSGKTRNVSFRRKQLENLLR
CYEEHENEIISALEADLRRPKQESLIVETEFMKNDIRHILFQLDEWVQSE
KPPKSFVNMMDDVQIYNDPFGVVLVIGAWNYPLQLLLVPVASAIAAGNCV
VIKPSEIAANCAKFIADVIPKYLDNDCYPVVCGGPSETAELLNQRFDYIF
YTGSTRVGKIIHAAANKYLTPTTLELGGKSPCYIDKSVDMRTAVKRILWG
KLINCGQTCIAPDYILCSKEVTTMPASVSSNPPSWWTASFLDH

BO26150.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
Aldh-III-PO 563 CG11140-PO 1..321 1..321 1682 100 Plus
Aldh-III-PN 563 CG11140-PN 1..321 1..321 1682 100 Plus
Aldh-III-PP 563 CG11140-PP 1..322 1..321 1670 99.7 Plus
Aldh-III-PQ 564 CG11140-PQ 1..322 1..321 1670 99.7 Plus
Aldh-III-PR 497 CG11140-PR 1..256 66..321 1343 100 Plus