BO26157.complete Sequence
394 bp assembled on 2010-06-29
GenBank Submission: KX797335
> BO26157.complete
GAAGTTATCAGTCGACATGGATATTTTTTCCAATTGTCCGGGCTTTTGCC
CCTCCTGCGGCTCCATTCTGCCCGAGCTTCAAGTCAAGGGCAATGTGATT
TGCTACAACTGCAAGAAGGAGTTTCAGCCAGATGTTTACAGCGGCGAGAA
GTCCGAGTTTACCATACACTTCAACACCTACGATCCCAGCAAGGTGTTCA
ACAGGACGAAAAGGGAGTCGGAATCGGACGCGGATGGCCCCGTTGTGGAG
AGGAAGTGTCCCAAGTGCAACCACGACAAGATGTCCTATGCCACCCTGCA
GCTTCGATCGGCGGACGAAGGCCAGACGGTGTTCTTTACCTGCCTTAAGT
GCAAATTCAAAGAATCCGAAAACTCTGCAAGCTTTCTAGACCAT
BO26157.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:30:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpI12-RA | 363 | CG13418-PA | 1..360 | 17..376 | 1800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:30:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpI12-RA | 530 | CG13418-RA | 81..441 | 16..376 | 1805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:30:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21777378..21777598 | 354..134 | 1105 | 100 | Minus |
| 3R | 32079331 | 3R | 21777649..21777767 | 134..16 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:30:08 has no hits.
BO26157.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:10 Download gff for
BO26157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpI12-RA | 23..382 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:52 Download gff for
BO26157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpI12-RA | 82..441 | 17..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:09 Download gff for
BO26157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpI12-RA | 82..441 | 17..378 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:09 Download gff for
BO26157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21777290..21777313 | 355..378 | 91 | <- | Minus |
| 3R | 21777378..21777597 | 135..354 | 100 | <- | Minus |
| 3R | 21777649..21777766 | 17..134 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:52 Download gff for
BO26157.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17603012..17603035 | 355..378 | 91 | <- | Minus |
| arm_3R | 17603100..17603319 | 135..354 | 100 | <- | Minus |
| arm_3R | 17603371..17603488 | 17..134 | 100 | | Minus |
BO26157.pep Sequence
Translation from 16 to 394
> BO26157.pep
MDIFSNCPGFCPSCGSILPELQVKGNVICYNCKKEFQPDVYSGEKSEFTI
HFNTYDPSKVFNRTKRESESDADGPVVERKCPKCNHDKMSYATLQLRSAD
EGQTVFFTCLKCKFKESENSASFLDH
BO26157.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:39:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpI12-PA | 120 | CG13418-PA | 1..120 | 1..120 | 662 | 100 | Plus |
