BO26166.complete Sequence
301 bp assembled on 2010-06-29
GenBank Submission: KX793898
> BO26166.complete
GAAGTTATCAGTCGACATGATGAACCTGTCGAGAGCTGTTGTCCGTAGCT
TCGCTACCACCGCTGGCCGCCGGTCCGCCGCCGTGCCCAAGGACCAGATC
GAGAAGGGATACTTCGAGATCCGCAAGGTGCAGGAGCACTTTCAGAAGAA
GGACGGCAAGCCCGTCTTCCTCAAGGGATCCGTCGTGGACAACGTGCTCT
ACCGCGTCACCGTCGCTCTCGCCCTCGTCGGCATCGGTGGCATGGGCAAG
CTTTTCTACGAGCTGAGTGTTCCCAAGAAGGAGGCAAGCTTTCTAGACCA
T
BO26166.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:29:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9603-RA | 270 | CG9603-PA | 1..267 | 17..283 | 1335 | 100 | Plus |
| CG9603-RB | 297 | CG9603-PB | 46..294 | 35..283 | 1245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:29:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9603-RA | 621 | CG9603-RA | 114..380 | 17..283 | 1335 | 100 | Plus |
| CG9603-RB | 566 | CG9603-RB | 77..325 | 35..283 | 1245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:29:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8340523..8340771 | 283..35 | 1245 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:29:28 has no hits.
BO26166.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:04 Download gff for
BO26166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9603-RA | 112..378 | 17..285 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:35 Download gff for
BO26166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9603-RA | 114..380 | 17..285 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:51 Download gff for
BO26166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9603-RA | 114..380 | 17..285 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:51 Download gff for
BO26166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8340520..8340771 | 35..285 | 99 | <- | Minus |
| 3R | 8340913..8340930 | 17..34 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:35 Download gff for
BO26166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4166242..4166493 | 35..285 | 99 | <- | Minus |
| arm_3R | 4166635..4166652 | 17..34 | 100 | | Minus |
BO26166.pep Sequence
Translation from 16 to 301
> BO26166.pep
MMNLSRAVVRSFATTAGRRSAAVPKDQIEKGYFEIRKVQEHFQKKDGKPV
FLKGSVVDNVLYRVTVALALVGIGGMGKLFYELSVPKKEASFLDH
BO26166.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:42:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9603-PA | 89 | CG9603-PA | 1..89 | 1..89 | 444 | 100 | Plus |
| CG9603-PB | 98 | CG9603-PB | 16..98 | 7..89 | 415 | 100 | Plus |
