BO26169.complete Sequence
751 bp assembled on 2010-06-29
GenBank Submission: KX793977
> BO26169.complete
GAAGTTATCAGTCGACATGGAGTACGTTCAGTTCAAAAACGGATCCCCAG
TCTACTACAAGGAGCAGCCAGACCTCAATGAGTGCATTCAATACCAACCC
TACCGTACAACTCCGCTGGTCCTGCCCGGCGCCAAAGTGAAGAAGGATGC
GCCCACGACAGAGTCCTACTTGAGGCACTACCCCAACCCGGCTGTGCGCG
CCCACCCAGGACACGACTACCATGACAGTATCATGAAGCAGCGCGTGGCC
GACACCATGCTGCACAAGGTGGTCGGTTCGGAAGCCGACACTGGCCGCGT
CTTCCACAAGCAATTCAACTCGCCCATTGGCCTGTACTCCAACAACAACA
TCGAGGACACCATCAGATCCACAGTTCCCTTCGCCACAAGCGAAAGCAAT
CGCTTGAAGGACAGTCCTTTGCATCGTCCTTTGCCAACAAAACTTAACGG
CTATAAGAAAACTGTCCAGTACGATCCCAGGAACAGCGAAACCTACAGAG
CCATTCAAGAAGAGGGCGGCTACAGCAACTATGGCCAATCCTCGCCACAG
GAAGTGACCATTCCTGTGCAGACTAAGGTCTATCAGCCCAATAGATTGGT
TCCAGGAAAGAAACCAGTATCAGCGCCAGTATCCCGGCCGCCGTACAATG
TGGTAAACACCCACGATGAGAACATACGCCAGAGCGGCTCCTTCAATCGT
CTCATGTACAGCGTGATTGGTGCCACCGAGTACGCAAGCTTTCTAGACCA
T
BO26169.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:29:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp66-RA | 720 | CG6416-PA | 1..717 | 17..733 | 3585 | 100 | Plus |
| Zasp66-RJ | 720 | CG6416-PJ | 1..717 | 17..733 | 3585 | 100 | Plus |
| Zasp66-RF | 1209 | CG6416-PF | 571..1206 | 98..733 | 3180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:29:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp66-RA | 1212 | CG6416-RA | 173..889 | 17..733 | 3585 | 100 | Plus |
| Zasp66-RJ | 1352 | CG6416-RJ | 313..1029 | 17..733 | 3585 | 100 | Plus |
| Zasp66-RF | 1714 | CG6416-RF | 756..1391 | 98..733 | 3180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:29:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8634579..8634785 | 94..300 | 1020 | 99.5 | Plus |
| 3L | 28110227 | 3L | 8637438..8637598 | 450..610 | 805 | 100 | Plus |
| 3L | 28110227 | 3L | 8638267..8638350 | 650..733 | 420 | 100 | Plus |
| 3L | 28110227 | 3L | 8630555..8630635 | 17..97 | 405 | 100 | Plus |
| 3L | 28110227 | 3L | 8635002..8635081 | 299..378 | 400 | 100 | Plus |
| 3L | 28110227 | 3L | 8635681..8635763 | 379..461 | 370 | 96.4 | Plus |
| 3L | 28110227 | 3L | 8638155..8638198 | 609..652 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:29:09 has no hits.
BO26169.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:00 Download gff for
BO26169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6416-RA | 167..883 | 17..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:27 Download gff for
BO26169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp66-RJ | 313..1029 | 17..735 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:45 Download gff for
BO26169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zasp66-RJ | 313..1029 | 17..735 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:45 Download gff for
BO26169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8630555..8630635 | 17..97 | 100 | -> | Plus |
| 3L | 8634583..8634783 | 98..298 | 100 | -> | Plus |
| 3L | 8635002..8635081 | 299..378 | 100 | -> | Plus |
| 3L | 8635681..8635752 | 379..450 | 100 | -> | Plus |
| 3L | 8637439..8637598 | 451..610 | 100 | -> | Plus |
| 3L | 8638157..8638195 | 611..649 | 100 | -> | Plus |
| 3L | 8638267..8638350 | 650..735 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:27 Download gff for
BO26169.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 8623655..8623735 | 17..97 | 100 | -> | Plus |
| arm_3L | 8627683..8627883 | 98..298 | 100 | -> | Plus |
| arm_3L | 8628102..8628181 | 299..378 | 100 | -> | Plus |
| arm_3L | 8628781..8628852 | 379..450 | 100 | -> | Plus |
| arm_3L | 8630539..8630698 | 451..610 | 100 | -> | Plus |
| arm_3L | 8631257..8631295 | 611..649 | 100 | -> | Plus |
| arm_3L | 8631367..8631450 | 650..735 | 97 | | Plus |
BO26169.pep Sequence
Translation from 16 to 751
> BO26169.pep
MEYVQFKNGSPVYYKEQPDLNECIQYQPYRTTPLVLPGAKVKKDAPTTES
YLRHYPNPAVRAHPGHDYHDSIMKQRVADTMLHKVVGSEADTGRVFHKQF
NSPIGLYSNNNIEDTIRSTVPFATSESNRLKDSPLHRPLPTKLNGYKKTV
QYDPRNSETYRAIQEEGGYSNYGQSSPQEVTIPVQTKVYQPNRLVPGKKP
VSAPVSRPPYNVVNTHDENIRQSGSFNRLMYSVIGATEYASFLDH
BO26169.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zasp66-PA | 239 | CG6416-PA | 1..239 | 1..239 | 1279 | 100 | Plus |
| Zasp66-PJ | 239 | CG6416-PJ | 1..239 | 1..239 | 1279 | 100 | Plus |
| Zasp66-PF | 402 | CG6416-PF | 177..402 | 17..239 | 1136 | 96 | Plus |
| Zasp66-PE | 430 | CG6416-PE | 205..430 | 17..239 | 1136 | 96 | Plus |
| Zasp66-PI | 215 | CG6416-PI | 1..215 | 1..239 | 1118 | 90 | Plus |
