Clone BO26172 Report

Search the DGRC for BO26172

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:261
Well:72
Vector:pDNR-Dual
Associated Gene/TranscriptCG3781-RA
Protein status:BO26172.pep: Imported from assembly
Sequenced Size:697

Clone Sequence Records

BO26172.complete Sequence

697 bp assembled on 2010-06-29

GenBank Submission: KX796711

> BO26172.complete
GAAGTTATCAGTCGACATGGAATCGCCCAGTGCCCGAACTCTCGGGAATT
CCCTGGGCGATGACAGCGGCAACGGGAATGAAAACGGGAATGGAAGTGGA
AACGGAAACACCACAATGATGCCGCATGGAATCTACCATGAGCGGCAGAC
ACGTCACCTGTGCGGCCTCCACGCACTGAACAATCTGTTCCAGGGGCCCG
ACATGTTCTCCAAATCGGAACTGGACGACTACTGCACCACATTGACCCCG
CGCAACTGGCTGAATCCGCATCGATCGTGGATCGGTTGGGGCAACTACGA
CGTCAATGTGATCATGTACGCCCTGCAGCAGCGGAATTGCGAGGCGGTGT
GGTTTGATCGACGGCGGGATCCACACTGTCTCAATCTGAGCGTCATTTTC
GGCTTCATTCTCAATGTACCGGCTCAGATGAGCCTGGGCTACTACATCCC
ACTGCCCTTCCACATGCGACACTGGCTGGCACTGCGTCGCTTGAACGGCA
GCTACTACAATCTGGACTCCAAGCTGCGCGAGCCCAAGTGCCTGGGCACC
GAGCAGCAGTTCCTCGAGTTTCTGGCCACCCAACTGCAGATGGATCACGA
GCTATTCCTCGTGTTGGACGAGGAGACGGACTGCAAGGATAAGAGCCAGC
AACGTTGGCTGCTACCGCAGTTCAGGGATGCAAGCTTTCTAGACCAT

BO26172.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:30:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG3781-RA 666 CG3781-PA 1..663 17..679 3315 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:30:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG3781-RA 951 CG3781-RA 97..763 13..679 3320 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:30:02
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6261265..6261931 13..679 3320 99.9 Plus
Blast to na_te.dros performed on 2014-11-26 14:30:03 has no hits.

BO26172.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:09 Download gff for BO26172.complete
Subject Subject Range Query Range Percent Splice Strand
CG3781-RA 30..692 17..681 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:49 Download gff for BO26172.complete
Subject Subject Range Query Range Percent Splice Strand
CG3781-RA 101..763 17..681 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:06 Download gff for BO26172.complete
Subject Subject Range Query Range Percent Splice Strand
CG3781-RA 101..763 17..681 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:06 Download gff for BO26172.complete
Subject Subject Range Query Range Percent Splice Strand
X 6261269..6261931 17..681 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:49 Download gff for BO26172.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6155302..6155964 17..681 99   Plus

BO26172.pep Sequence

Translation from 16 to 697

> BO26172.pep
MESPSARTLGNSLGDDSGNGNENGNGSGNGNTTMMPHGIYHERQTRHLCG
LHALNNLFQGPDMFSKSELDDYCTTLTPRNWLNPHRSWIGWGNYDVNVIM
YALQQRNCEAVWFDRRRDPHCLNLSVIFGFILNVPAQMSLGYYIPLPFHM
RHWLALRRLNGSYYNLDSKLREPKCLGTEQQFLEFLATQLQMDHELFLVL
DEETDCKDKSQQRWLLPQFRDASFLDH

BO26172.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:39:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG3781-PA 221 CG3781-PA 1..221 1..221 1228 100 Plus