BO26172.complete Sequence
697 bp assembled on 2010-06-29
GenBank Submission: KX796711
> BO26172.complete
GAAGTTATCAGTCGACATGGAATCGCCCAGTGCCCGAACTCTCGGGAATT
CCCTGGGCGATGACAGCGGCAACGGGAATGAAAACGGGAATGGAAGTGGA
AACGGAAACACCACAATGATGCCGCATGGAATCTACCATGAGCGGCAGAC
ACGTCACCTGTGCGGCCTCCACGCACTGAACAATCTGTTCCAGGGGCCCG
ACATGTTCTCCAAATCGGAACTGGACGACTACTGCACCACATTGACCCCG
CGCAACTGGCTGAATCCGCATCGATCGTGGATCGGTTGGGGCAACTACGA
CGTCAATGTGATCATGTACGCCCTGCAGCAGCGGAATTGCGAGGCGGTGT
GGTTTGATCGACGGCGGGATCCACACTGTCTCAATCTGAGCGTCATTTTC
GGCTTCATTCTCAATGTACCGGCTCAGATGAGCCTGGGCTACTACATCCC
ACTGCCCTTCCACATGCGACACTGGCTGGCACTGCGTCGCTTGAACGGCA
GCTACTACAATCTGGACTCCAAGCTGCGCGAGCCCAAGTGCCTGGGCACC
GAGCAGCAGTTCCTCGAGTTTCTGGCCACCCAACTGCAGATGGATCACGA
GCTATTCCTCGTGTTGGACGAGGAGACGGACTGCAAGGATAAGAGCCAGC
AACGTTGGCTGCTACCGCAGTTCAGGGATGCAAGCTTTCTAGACCAT
BO26172.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:30:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3781-RA | 666 | CG3781-PA | 1..663 | 17..679 | 3315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:30:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3781-RA | 951 | CG3781-RA | 97..763 | 13..679 | 3320 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:30:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6261265..6261931 | 13..679 | 3320 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:30:03 has no hits.
BO26172.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:09 Download gff for
BO26172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3781-RA | 30..692 | 17..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:35:49 Download gff for
BO26172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3781-RA | 101..763 | 17..681 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:06 Download gff for
BO26172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3781-RA | 101..763 | 17..681 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:06 Download gff for
BO26172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6261269..6261931 | 17..681 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:35:49 Download gff for
BO26172.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6155302..6155964 | 17..681 | 99 | | Plus |
BO26172.pep Sequence
Translation from 16 to 697
> BO26172.pep
MESPSARTLGNSLGDDSGNGNENGNGSGNGNTTMMPHGIYHERQTRHLCG
LHALNNLFQGPDMFSKSELDDYCTTLTPRNWLNPHRSWIGWGNYDVNVIM
YALQQRNCEAVWFDRRRDPHCLNLSVIFGFILNVPAQMSLGYYIPLPFHM
RHWLALRRLNGSYYNLDSKLREPKCLGTEQQFLEFLATQLQMDHELFLVL
DEETDCKDKSQQRWLLPQFRDASFLDH
BO26172.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:39:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3781-PA | 221 | CG3781-PA | 1..221 | 1..221 | 1228 | 100 | Plus |