BO26180.complete Sequence
748 bp assembled on 2010-12-01
GenBank Submission: KX795129
> BO26180.complete
GAAGTTATCAGTCGACATGTCTTCGGTGCTGCATCTACTGGGTTTCTTGT
GGCTTCCTTTGCTGGTTTATAGTGTATCCAATGATATGGGAGGATTGCAG
AAATGTACAGAACTTCTAAATACACATAAGTTGGTCTACTGTTGTGGCAA
ATCCTTTCTGGATAAGTTCCCCTTTGTTGGCAGCAATTGCACACCGTTTT
GGGATGACTATGGTCCTTGCCGCTATGAATGTCTGTATAGGCACTGGGAC
CTCCTTGATCAGGATAACAAGATCAAAAAACCGGAGCTCTACCTGATGAT
CACCAGCCTCTACAGCCCCTTGAATGGTTATGATAAATACGGGGCCGCTT
TTAAGGCAGCTCACGAGACTTGCGAAGCTCTGGGCTCCAGACACGCCGAC
TTTCTGCTGCTCTACTCCAACCAGGTGGCGGATAAGATGGGCATGGCTTC
CTCAACCTGTCTGCCATATGCCATGCTTCATGCACAGTGTACCATGGTAT
ACCTAACCGCCAACTGTCCCCGTGAGAACTGGATAGATGATCCGAAGTGC
AATAGTCTGCAAAAATTGCTGTCAAGTTGCACAAAGAAATTGGACGAAAA
GACGAATGCACTTAAGGGAAAGGATGAGGAACTAACGGACAACGGGTGTG
GGCATATAGATTCAGAAGGATCCAATCTGCTCATGGCCTGTTTTCTCACA
CTGATGATCGCCAAGTTCATATCGGATCATGCAAGCTTTCTAGACCAT
BO26180.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:37:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50b-RB | 717 | CG30073-PB | 1..714 | 17..730 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:37:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50b-RB | 1648 | CG30073-RB | 64..777 | 17..730 | 3570 | 100 | Plus |
| Obp50c-RC | 1648 | CG30072-RC | 64..777 | 17..730 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14371504..14372016 | 218..730 | 2565 | 100 | Plus |
| 2R | 25286936 | 2R | 14371249..14371449 | 17..217 | 1005 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:37:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BS | 5142 | BS BS 5142bp | 2790..2847 | 461..513 | 108 | 69 | Plus |
BO26180.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-12-01 09:51:17 Download gff for
BO26180.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50b-RA | 68..781 | 17..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:33:45 Download gff for
BO26180.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50c-RB | 64..777 | 17..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:04 Download gff for
BO26180.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp50c-RC | 64..777 | 17..732 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:04 Download gff for
BO26180.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14371249..14371449 | 17..217 | 100 | -> | Plus |
| 2R | 14371504..14372016 | 218..732 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:33:45 Download gff for
BO26180.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10258754..10258954 | 17..217 | 100 | -> | Plus |
| arm_2R | 10259009..10259521 | 218..732 | 99 | | Plus |
BO26180.pep Sequence
Translation from 16 to 748
> BO26180.pep
MSSVLHLLGFLWLPLLVYSVSNDMGGLQKCTELLNTHKLVYCCGKSFLDK
FPFVGSNCTPFWDDYGPCRYECLYRHWDLLDQDNKIKKPELYLMITSLYS
PLNGYDKYGAAFKAAHETCEALGSRHADFLLLYSNQVADKMGMASSTCLP
YAMLHAQCTMVYLTANCPRENWIDDPKCNSLQKLLSSCTKKLDEKTNALK
GKDEELTDNGCGHIDSEGSNLLMACFLTLMIAKFISDHASFLDH
BO26180.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:46:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp50b-PB | 238 | CG30073-PB | 1..238 | 1..238 | 1307 | 100 | Plus |
