BO26187.complete Sequence
1567 bp assembled on 2010-06-30
GenBank Submission: KX797479
> BO26187.complete
GAAGTTATCAGTCGACATGTTTTTGGAAGTCCTGTTCGCTGCTCCACTTG
TGATTTTCATTTTTCGCAAGTTATGGGCTCATTTGAATAGGACCTATTTC
ATCCTGAGTCTTTGCAAACGAATTCGAACAGAAGACGGTAGTTTGTTGGA
AAGTAAAATTTACGTAGCGCCGAGCAAAACCCGATTTGGAAACAACTTTG
ACCTCGTAAACTTTACATCTGAAAGCATATTTAACTTCATGAGAGATGCA
TCTGCAAAAGCGAAAGGTCGAAACTATCTATGGTATTTTTTCCATGCACC
CATGTATAATATTGTTCGGGCCGAGGAAGCCGAGGAGATATTGCAAAGTT
CCAAGCTTATTACCAAAAATATGATCTACGAGCTTTTGAAACCGTTTTTG
GGCGAAGGACTGCTGATTAGCACAGATCAGAAATGGCACTCTAGAAGAAA
AGCCCTGACTCCTGCTTTTCACTTTAAGGTGCTGCAATCTTTTCTGATCA
TATTCAAAGAAGAGTGCAATAAACTTGTGAAAGTCCTGCATCAAAGTGTG
AATATGGAGTTGGAGCTCAATCAGGTTATTCCTCAGTTTACGCTAAACAA
TGTTTGCGAAACCGCACTGGGAGTAAAACTTGATGACTTGTCGGAGGGTA
TTCGATATCGCCAGTCGATTCACGCCATTGAAGAAGTTATGCAGCAGCGC
TTATGCAATCCGTTCTTCTATAACATTGTGTATTTCTTTCTATTCGGCGA
CTATCGAAAGCAGGTGAATAATTTGAAGATAGCCCACGAGTTTTCCAGTA
ACATCATAGAGAAAAGGAGGAGCCTCTTCAAAAGCAACCAGCTTGGTCAA
GAGGATGAATTTGGCAAGAAGCAGCGATACGCCATGCTTGATACCCTGTT
AGCAGCCGAAGCAGATGGTCAGATCGATCATCAGGGTATCTGCGATGAGG
TCAATACCTTTATGTTCGAGGGATACGATACTACGTCCACCTGTCTAATA
TTTACCCTATTGATGCTGGCACTCCACGAGGATGTCCAGAAGAAGTGCTA
TGAGGAGATCAAATACCTTCCCGATGATAGCGACGATATCAGTGTGTTTC
AGTTTAATGAACTGGTCTATATGGAATGTGTGATCAAGGAATCTCTTCGC
TTGTTTCCCTCGGTGCCTTTCATTGGACGTCGGTGCGTGGAGGAGGGTGT
GGTCAACGGTTTAATCATGCCCAAGAACACCCAAATCAACATTCACCTTT
ACGAAATCATGAGGGATGCCCGACACTTTTCAAACCCAAAAATGTTTCAA
CCGGATCGATTCTTTCCGGAGAACACAGTGAATCGTCATCCCTTCGCTTT
TGTGCCATTTAGTGCGGGACAAAGGAATTGCATTGGTCAAAAGTTTGCTA
TCCTAGAGATTAAAGTTCTTCTGGCTGCGGTCATCAGGAATTTTAAAATA
TTACCTGTTACTCTTCTCGATGATCTTACTTTTGAAAATGGAATTGTGCT
GCGAACGAAGCAAAATATTAAAGTTAAACTGGTGCATAGGGAAAATAAAG
CAAGCTTTCTAGACCAT
BO26187.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:34:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4ac2-RB | 1536 | CG17970-PB | 1..1533 | 17..1549 | 7665 | 100 | Plus |
| Cyp4ac1-RA | 1530 | CG14032-PA | 150..1484 | 169..1503 | 1935 | 76.3 | Plus |
| Cyp4ac3-RA | 1530 | CG14031-PA | 823..1509 | 842..1528 | 945 | 75.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:34:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4ac2-RB | 1709 | CG17970-RB | 41..1573 | 17..1549 | 7665 | 100 | Plus |
| Cyp4ac1-RA | 1666 | CG14032-RA | 183..1517 | 169..1503 | 1935 | 76.3 | Plus |
| Cyp4ac3-RA | 1606 | CG14031-RA | 871..1557 | 842..1528 | 945 | 75.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:34:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5267378..5268319 | 608..1549 | 4710 | 100 | Plus |
| 2L | 23513712 | 2L | 5265101..5265750 | 854..1503 | 1600 | 83.1 | Plus |
| 2L | 23513712 | 2L | 5266432..5266636 | 17..221 | 1025 | 100 | Plus |
| 2L | 23513712 | 2L | 5266694..5266898 | 221..425 | 1025 | 100 | Plus |
| 2L | 23513712 | 2L | 5269594..5270280 | 842..1528 | 945 | 75.8 | Plus |
| 2L | 23513712 | 2L | 5267095..5267195 | 508..608 | 505 | 100 | Plus |
| 2L | 23513712 | 2L | 5266956..5267039 | 424..507 | 420 | 100 | Plus |
| 2L | 23513712 | 2L | 5264349..5264497 | 275..423 | 250 | 77.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:34:11 has no hits.
BO26187.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-30 17:33:29 Download gff for
BO26187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac2-RB | 49..1573 | 25..1551 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:22:30 Download gff for
BO26187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac2-RB | 49..1573 | 25..1551 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:31:52 Download gff for
BO26187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cyp4ac2-RB | 49..1573 | 25..1551 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:31:52 Download gff for
BO26187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5266958..5267039 | 426..507 | 100 | -> | Plus |
| 2L | 5267095..5267195 | 508..608 | 100 | -> | Plus |
| 2L | 5266440..5266636 | 25..221 | 100 | -> | Plus |
| 2L | 5266695..5266898 | 222..425 | 100 | -> | Plus |
| 2L | 5267379..5268319 | 609..1551 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:22:30 Download gff for
BO26187.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5266440..5266636 | 25..221 | 100 | -> | Plus |
| arm_2L | 5266695..5266898 | 222..425 | 100 | -> | Plus |
| arm_2L | 5266958..5267039 | 426..507 | 100 | -> | Plus |
| arm_2L | 5267095..5267195 | 508..608 | 100 | -> | Plus |
| arm_2L | 5267379..5268319 | 609..1551 | 99 | | Plus |
BO26187.pep Sequence
Translation from 16 to 1567
> BO26187.pep
MFLEVLFAAPLVIFIFRKLWAHLNRTYFILSLCKRIRTEDGSLLESKIYV
APSKTRFGNNFDLVNFTSESIFNFMRDASAKAKGRNYLWYFFHAPMYNIV
RAEEAEEILQSSKLITKNMIYELLKPFLGEGLLISTDQKWHSRRKALTPA
FHFKVLQSFLIIFKEECNKLVKVLHQSVNMELELNQVIPQFTLNNVCETA
LGVKLDDLSEGIRYRQSIHAIEEVMQQRLCNPFFYNIVYFFLFGDYRKQV
NNLKIAHEFSSNIIEKRRSLFKSNQLGQEDEFGKKQRYAMLDTLLAAEAD
GQIDHQGICDEVNTFMFEGYDTTSTCLIFTLLMLALHEDVQKKCYEEIKY
LPDDSDDISVFQFNELVYMECVIKESLRLFPSVPFIGRRCVEEGVVNGLI
MPKNTQINIHLYEIMRDARHFSNPKMFQPDRFFPENTVNRHPFAFVPFSA
GQRNCIGQKFAILEIKVLLAAVIRNFKILPVTLLDDLTFENGIVLRTKQN
IKVKLVHRENKASFLDH
BO26187.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:10:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cyp4ac2-PB | 511 | CG17970-PB | 1..511 | 1..511 | 2654 | 100 | Plus |
| Cyp4ac1-PA | 509 | CG14032-PA | 5..507 | 6..508 | 2068 | 75.1 | Plus |
| Cyp4ac3-PA | 509 | CG14031-PA | 5..507 | 6..508 | 1895 | 69.8 | Plus |
| Cyp4p1-PA | 513 | CG10842-PA | 16..512 | 20..508 | 1138 | 47.1 | Plus |
| Cyp4p3-PA | 515 | CG10843-PA | 10..515 | 14..509 | 1085 | 45.1 | Plus |
