BO26190.complete Sequence
1033 bp assembled on 2010-06-29
GenBank Submission: KX793832
> BO26190.complete
GAAGTTATCAGTCGACATGCCGTCGCCAGGACACCACACATCATTCTGCT
GCTCCACGGCAGGATTTATCGCTTGCTCAGCAATCGTTCTGCTTTGCAGT
TCCGAGGTCCTGTCTAGTTGGGAAGAGTGGTGGACATACGATGGCATATC
CGGACCAAGCTTCTGGGGCCTCATCAATCCGCAGTGGAATATGTGCAACA
AAGGACGCCGCCAATCGCCCATCGACGTGGTGCCCGACAAGTTGCTCTTC
GATCCATATTTGCGGCCCCTGCACATTGACAAGCACAAGGTTTCCGGCAC
TCTGCACAACACGGGCCAGTCGCTGGTCTTCCGCGTGGACAAGGACACCA
AGCAGCACGTGAACATATCCGGTGGACCGTTGGCCTACCGCTACCAGTTC
GAGGAGATCTACATACATTATGGCACGGAGAATGTTCGCGGATCCGAGCA
CTTCATCCAGGGCTATAGCTTTCCCGGCGAGATCCAAATCTATGGATTCA
ACAAGGAGCTGTACCACAACATGTCCGAGGCGCAGCACAAGTCGCAGGGA
ATCGTTGGACTCTCGTTGATGGTGCAAATTGGCGAGACGCCCAATCCGGA
GCTACGGATCATCACGAGCACCTTCAACAAGGTGTTGTATAGAGGATTCT
CCACGCCCATCCGACACATATCCGTGAGGTCGCTGCTGCCGAACACGGAT
CACTACATCACCTATGAGGGCTCCACGACGCATCCGGGCTGCTGGGAGAG
CACCGTCTGGATCATAGTTAATAAGCCCATCTATATCACCAAACAGGAGT
TGTACCAACTCCGACGACTGATGCAAGGCTCCGAGAGTACACCCAAAGCT
CCACTAGGTAATAATGCGCGACCAGTGCAAAGTTTACACCATAGAACCGT
AAGAACGAACATAGATTTTAAGCGAAACAAGAATCAATATGCGTGCCCCT
CGATGTACAAGGATATGTACTATAGGGCGAATCGATGGTCACCCGACACG
GGACTTTTGATACGTGCAAGCTTTCTAGACCAT
BO26190.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:33:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1402-RC | 1002 | CG1402-PC | 1..999 | 17..1015 | 4995 | 100 | Plus |
| CG1402-RB | 1002 | CG1402-PB | 1..999 | 17..1015 | 4995 | 100 | Plus |
| CG32698-RD | 984 | CG32698-PD | 73..254 | 116..297 | 295 | 77.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:33:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1402-RC | 3875 | CG1402-RC | 551..1549 | 17..1015 | 4995 | 100 | Plus |
| CG1402-RB | 1881 | CG1402-RB | 551..1549 | 17..1015 | 4995 | 100 | Plus |
| CG32698-RD | 1775 | CG32698-RD | 561..742 | 116..297 | 295 | 77.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:33:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 7837041..7837234 | 288..481 | 970 | 100 | Plus |
| X | 23542271 | X | 7837323..7837488 | 480..645 | 830 | 100 | Plus |
| X | 23542271 | X | 7838695..7838851 | 643..799 | 785 | 100 | Plus |
| X | 23542271 | X | 7836791..7836930 | 152..291 | 700 | 100 | Plus |
| X | 23542271 | X | 7839716..7839849 | 798..931 | 670 | 100 | Plus |
| X | 23542271 | X | 7826747..7826834 | 17..104 | 440 | 100 | Plus |
| X | 23542271 | X | 7840268..7840353 | 930..1015 | 430 | 100 | Plus |
| X | 23542271 | X | 7835026..7835079 | 100..153 | 255 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:33:40 has no hits.
BO26190.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:47 Download gff for
BO26190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1402-RB | 307..1305 | 17..1017 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:21 Download gff for
BO26190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1402-RB | 551..1549 | 17..1017 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:30 Download gff for
BO26190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1402-RB | 551..1549 | 17..1017 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:30 Download gff for
BO26190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 7838697..7838851 | 645..799 | 100 | -> | Plus |
| X | 7839718..7839849 | 800..931 | 100 | -> | Plus |
| X | 7826747..7826834 | 17..104 | 100 | -> | Plus |
| X | 7835031..7835078 | 105..152 | 100 | -> | Plus |
| X | 7836792..7836928 | 153..289 | 100 | -> | Plus |
| X | 7837043..7837234 | 290..481 | 100 | -> | Plus |
| X | 7837325..7837487 | 482..644 | 100 | -> | Plus |
| X | 7840270..7840353 | 932..1017 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:21 Download gff for
BO26190.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7720780..7720867 | 17..104 | 100 | -> | Plus |
| arm_X | 7729064..7729111 | 105..152 | 100 | -> | Plus |
| arm_X | 7730825..7730961 | 153..289 | 100 | -> | Plus |
| arm_X | 7731076..7731267 | 290..481 | 100 | -> | Plus |
| arm_X | 7731358..7731520 | 482..644 | 100 | -> | Plus |
| arm_X | 7732730..7732884 | 645..799 | 100 | -> | Plus |
| arm_X | 7733751..7733882 | 800..931 | 100 | -> | Plus |
| arm_X | 7734303..7734386 | 932..1017 | 97 | | Plus |
BO26190.pep Sequence
Translation from 16 to 1033
> BO26190.pep
MPSPGHHTSFCCSTAGFIACSAIVLLCSSEVLSSWEEWWTYDGISGPSFW
GLINPQWNMCNKGRRQSPIDVVPDKLLFDPYLRPLHIDKHKVSGTLHNTG
QSLVFRVDKDTKQHVNISGGPLAYRYQFEEIYIHYGTENVRGSEHFIQGY
SFPGEIQIYGFNKELYHNMSEAQHKSQGIVGLSLMVQIGETPNPELRIIT
STFNKVLYRGFSTPIRHISVRSLLPNTDHYITYEGSTTHPGCWESTVWII
VNKPIYITKQELYQLRRLMQGSESTPKAPLGNNARPVQSLHHRTVRTNID
FKRNKNQYACPSMYKDMYYRANRWSPDTGLLIRASFLDH
BO26190.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:29:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1402-PC | 333 | CG1402-PC | 1..333 | 1..333 | 1823 | 100 | Plus |
| CG1402-PB | 333 | CG1402-PB | 1..333 | 1..333 | 1823 | 100 | Plus |
| CG32698-PD | 327 | CG32698-PD | 7..324 | 18..324 | 1023 | 55.7 | Plus |
| CG32698-PB | 327 | CG32698-PB | 7..324 | 18..324 | 1023 | 55.7 | Plus |
| CG32698-PC | 327 | CG32698-PC | 7..324 | 18..324 | 1023 | 55.7 | Plus |
