Clone BO26192 Report

Search the DGRC for BO26192

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:261
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG12680-RB
Protein status:BO26192.pep: Imported from assembly
Sequenced Size:679

Clone Sequence Records

BO26192.complete Sequence

679 bp assembled on 2010-06-29

GenBank Submission: KX797245

> BO26192.complete
GAAGTTATCAGTCGACATGGAGCTGGCAGGGATTAGGTACGGGTTCAGCT
TGTGGCTCCTCTTGCTCCATTTCAGCTGTATCCTGGCCATCATCGATCAC
ACAAAATGCAAAGAATGCGAACAGTACAAATACAAATTGCCAGAGAGATG
CAAATATTTGGTGGAGGATATTCATGTGTTTGAGCGAAAATGTGGCGGCA
CATATCCACTAATGGCATTTACCAAATATCGGGATACATTCGTTAAGACC
GGCGAACCATATTCCCTGTACATGCCAAGCTCCTTGGATCATGTGCTTCT
GCTGATGAAGGACTCCGCATTGCAGAGCTGTGCGCGCATTCAAGTGGGCG
ATACGAACACGTTCTTTTGCCTGGACGATAGCACCAATGAGACGATCAAA
CTGGATGTGGCCCACATGTATTGCTTCCCATTTCACATCCAGCTGCCGGA
TGATCTGATGCAGGAGTGCCTCATAGAGAATGAGATGACCAATGGCTTTC
TGAACGATATCCTTCGCACACGACGCGGCATCATCCACTATACCTTTGGC
TCTAGTCGGGGCCATCGTCTCAATTGTGGATATTTGTTGCCGAATCTCCT
GCTCCTCGTGCCTCATCTCCTGCCATCGATGATGAGTCGTAAATTTTTAT
GCGAGCTGCCAGCAAGCTTTCTAGACCAT

BO26192.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:33:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG12680-RC 648 CG12680-PC 1..645 17..661 3225 100 Plus
CG12680-RB 648 CG12680-PB 1..645 17..661 3225 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:33:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG12680-RC 948 CG12680-RC 99..743 17..661 3225 100 Plus
CG12680-RB 797 CG12680-RB 99..743 17..661 3225 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4997539..4998183 17..661 3225 100 Plus
Blast to na_te.dros performed on 2014-11-26 14:33:30 has no hits.

BO26192.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:46 Download gff for BO26192.complete
Subject Subject Range Query Range Percent Splice Strand
CG12680-RB 1..645 17..663 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:18 Download gff for BO26192.complete
Subject Subject Range Query Range Percent Splice Strand
CG12680-RB 99..743 17..663 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:26 Download gff for BO26192.complete
Subject Subject Range Query Range Percent Splice Strand
CG12680-RB 99..743 17..663 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:26 Download gff for BO26192.complete
Subject Subject Range Query Range Percent Splice Strand
X 4997539..4998183 17..663 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:18 Download gff for BO26192.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4891572..4892216 17..663 99   Plus

BO26192.pep Sequence

Translation from 16 to 679

> BO26192.pep
MELAGIRYGFSLWLLLLHFSCILAIIDHTKCKECEQYKYKLPERCKYLVE
DIHVFERKCGGTYPLMAFTKYRDTFVKTGEPYSLYMPSSLDHVLLLMKDS
ALQSCARIQVGDTNTFFCLDDSTNETIKLDVAHMYCFPFHIQLPDDLMQE
CLIENEMTNGFLNDILRTRRGIIHYTFGSSRGHRLNCGYLLPNLLLLVPH
LLPSMMSRKFLCELPASFLDH

BO26192.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:29:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG12680-PC 215 CG12680-PC 1..215 1..215 1165 100 Plus
CG12680-PB 215 CG12680-PB 1..215 1..215 1165 100 Plus