BO26193.complete Sequence
466 bp assembled on 2010-06-29
GenBank Submission: KX799639
> BO26193.complete
GAAGTTATCAGTCGACATGTGGAAGCTGGACACCAAAGGAGGAATCATCT
GCTCGGGCTGCCTGTCCATAGCCTTTGCCATAACCTATCTGGTTTTGATG
GACGATTACTTCTGGAAATATGGACTCTACGAGATGGGAATACACATTTC
GGCGCTGCAGATCTTGGGAAGCGTGGTCCTCATCGTTGGAGCCATAAAGC
AAAAGCACAAGTTCTTCGTGCCGTGGATGATAACCACAGGATTCTTTTTA
TACCTGATGGTGAACCTGTTCATTTCACTGATAGTCCAGGGCACAGCTTG
GATCTTCGGACCATTGATGGTCGTTCCGTTCACAGCCTATCTGGGCTGCG
CCCTGTACTCGGTGCAGAAGGCCTTCGACAGGATGCGCAAGGAGGAGCCA
CCGGCATATGCCAGCTTGTCCGACAAGAAGGAGTTCATCAATCACATAGC
AAGCTTTCTAGACCAT
BO26193.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:56:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12825-RA | 435 | CG12825-PA | 1..432 | 17..448 | 2160 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:56:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12825-RA | 585 | CG12825-RA | 49..482 | 15..448 | 2170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:56:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7789570..7789712 | 193..335 | 700 | 99.3 | Plus |
| 2R | 25286936 | 2R | 7789770..7789885 | 333..448 | 580 | 100 | Plus |
| 2R | 25286936 | 2R | 7789254..7789358 | 15..119 | 525 | 100 | Plus |
| 2R | 25286936 | 2R | 7789421..7789500 | 120..199 | 400 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:56:52 has no hits.
BO26193.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-09 16:56:57 Download gff for
BO26193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12825-RA | 43..474 | 17..450 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:39:32 Download gff for
BO26193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12825-RA | 51..482 | 17..450 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:14:24 Download gff for
BO26193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12825-RA | 51..482 | 17..450 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:14:24 Download gff for
BO26193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7789256..7789358 | 17..119 | 100 | -> | Plus |
| 2R | 7789421..7789500 | 120..199 | 100 | -> | Plus |
| 2R | 7789577..7789712 | 200..335 | 100 | -> | Plus |
| 2R | 7789773..7789885 | 336..450 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:39:32 Download gff for
BO26193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3676761..3676863 | 17..119 | 100 | -> | Plus |
| arm_2R | 3676926..3677005 | 120..199 | 100 | -> | Plus |
| arm_2R | 3677082..3677217 | 200..335 | 100 | -> | Plus |
| arm_2R | 3677278..3677390 | 336..450 | 98 | | Plus |
BO26193.pep Sequence
Translation from 16 to 466
> BO26193.pep
MWKLDTKGGIICSGCLSIAFAITYLVLMDDYFWKYGLYEMGIHISALQIL
GSVVLIVGAIKQKHKFFVPWMITTGFFLYLMVNLFISLIVQGTAWIFGPL
MVVPFTAYLGCALYSVQKAFDRMRKEEPPAYASLSDKKEFINHIASFLDH
BO26193.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:26:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12825-PA | 144 | CG12825-PA | 1..144 | 1..144 | 761 | 100 | Plus |
| CG12824-PB | 142 | CG12824-PB | 1..142 | 1..144 | 327 | 49 | Plus |
| CG12824-PA | 87 | CG12824-PA | 1..62 | 1..64 | 151 | 50 | Plus |
