Clone BO26194 Report

Search the DGRC for BO26194

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:261
Well:94
Vector:pDNR-Dual
Associated Gene/TranscriptCG13999-RA
Protein status:BO26194.pep: Imported from assembly
Sequenced Size:529

Clone Sequence Records

BO26194.complete Sequence

529 bp assembled on 2010-06-29

GenBank Submission: KX799003

> BO26194.complete
GAAGTTATCAGTCGACATGAAGCTAACACTGCGACGCTACTCCTGGGTGC
TCCTGTTCCAGTTCGCCCTTTTGGGAGTGGACCTCTTTTGCAACGCCTTT
GGTCCTTCGCTGGCCAGAAACCGATTGCAGACAGCCATAATTCTCTTTGT
CACTCAGGATGCCCTGATTATCGCGGAGTACCTGCTGTTCACCCTCGCCC
TGCACTCGACGTGTGTGTACCAGGTCGGCGCCTCGCACATAATCCTGCGG
AATTGCAAGCTCTTCATGGCCAGCATTACCATCTACTTCCTTCTGTCCGC
CTCCCAGCACTTTTGGATCATCTACCAATACCGTCAGCCGCCAGAAGAGG
ACGGTCATCATTGGCCACTGGGTCTGATTGCCCTATCAGTGGCACAGCGC
ATCATGTCGGTTTTCTATTACTACAGCTCCAAGTCGACGGCTCTGACCAT
GGCAGATCCTCGCTTCAAGGAGGAGCATCTTGACTGGATCGCAGATCAGC
TGGGCGATAAGGCAAGCTTTCTAGACCAT

BO26194.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:34:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG13999-RA 498 CG13999-PA 1..495 17..511 2475 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:34:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13999-RA 1041 CG13999-RA 241..736 16..511 2480 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:34:10
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5955781..5956034 404..151 1270 100 Minus
2L 23513712 2L 5956092..5956226 150..16 675 100 Minus
2L 23513712 2L 5955617..5955723 511..405 535 100 Minus
Blast to na_te.dros performed on 2014-11-26 14:34:11 has no hits.

BO26194.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-29 17:45:57 Download gff for BO26194.complete
Subject Subject Range Query Range Percent Splice Strand
CG13999-RA 226..720 17..513 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:37:33 Download gff for BO26194.complete
Subject Subject Range Query Range Percent Splice Strand
CG13999-RA 242..736 17..513 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:42 Download gff for BO26194.complete
Subject Subject Range Query Range Percent Splice Strand
CG13999-RA 242..736 17..513 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:42 Download gff for BO26194.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5955615..5955723 405..513 98 <- Minus
2L 5955781..5956034 151..404 100 <- Minus
2L 5956092..5956225 17..150 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:37:33 Download gff for BO26194.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5955615..5955723 405..513 98 <- Minus
arm_2L 5955781..5956034 151..404 100 <- Minus
arm_2L 5956092..5956225 17..150 100   Minus

BO26194.pep Sequence

Translation from 16 to 529

> BO26194.pep
MKLTLRRYSWVLLFQFALLGVDLFCNAFGPSLARNRLQTAIILFVTQDAL
IIAEYLLFTLALHSTCVYQVGASHIILRNCKLFMASITIYFLLSASQHFW
IIYQYRQPPEEDGHHWPLGLIALSVAQRIMSVFYYYSSKSTALTMADPRF
KEEHLDWIADQLGDKASFLDH

BO26194.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:28:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG13999-PA 165 CG13999-PA 1..165 1..165 862 100 Plus