BO26246.complete Sequence
928 bp assembled on 2010-07-09
GenBank Submission: KX800136
> BO26246.complete
GAAGTTATCAGTCGACATGAACAAGGTCGAGTTCAAAAACAAGAACAAGG
ATCAGGGACCCTGCGCCCGCGTGCGTAAGATTCGTCCAATTAACATGGGC
GGCAACGTGGAGCAGCGTCCTTGGACTCCAACTGTTAGGATCGGCAAGAT
CGCCGCCGAGACCACCAATCCGGGTCCAGCCACTGTCCAACTTCCAACCT
TGATAGGCAGCAAAGTTCCCGACTCCAAGAAGAAGGCCGCACCCTCGTAC
TCCTTTGGCCACAAGTTGGGCGGAAAGTATGACACCTCCGGACCGGGTCC
GGCGCAGTACAATGTTACGGGTATGCGAGCCAAGGGTCGGGATTATCCTC
GAGCAGCCACTCTGCAGAGCAGACCCAAGGAACTAACACGCTTCTCGAAT
CCCGGACCTGGGGAATACGATGTGGTGCCGGCGGCCAAGGCGGTGATCGA
TGCCACGCCCAAATACACTTTTGGCCAACGGCCGGTCGCGTTGAAAACCT
TCCAGATACCAGCTCCTAATGTCTACAAAATACCGACCGTCATGGGCAGC
AGCAAGGAGGGCAAGATTCGTTCGGCTCCGGCTTATACGATTACGGGTCG
GGAGAAGCCTCCGCTGATTCCGGTGATGATCTTCCCCGGACCCGGTTACT
ACGACGGCGAGTACACGGTGGTCAAACCAAAGCCACCAGTCTTCTCCATG
CGCGGCAAGTACAAGATGGGCAGCGAGGACTCGAAGCCCGGACCCGGAGC
GCACTGTCCGGAGAAGTACTGGGAGAAACGTTCGCCTCCTGCCATATCCT
TTGGCATCCTGCACTCCCCCTATATCAAGAAACCATTGCCAGTCAACGTT
CCGCAGCGTTGTGTTCGCTCTTTGTTGGAGAATCGGGCGGACAAGCCCTA
CGATAATATTGCAAGCTTTCTAGACCAT
BO26246.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:23:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8086-RB | 897 | CG8086-PB | 1..894 | 17..910 | 4470 | 100 | Plus |
| CG8086-RA | 819 | CG8086-PA | 1..816 | 95..910 | 4080 | 100 | Plus |
| CG8086-RK | 786 | CG8086-PK | 1..672 | 95..766 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:23:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8086-RB | 1053 | CG8086-RB | 116..1009 | 17..910 | 4470 | 100 | Plus |
| CG8086-RA | 1354 | CG8086-RA | 425..1310 | 25..910 | 4430 | 100 | Plus |
| CG8086-RK | 1508 | CG8086-RK | 425..1166 | 25..766 | 3710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:23:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8252228..8252536 | 512..204 | 1545 | 100 | Minus |
| 2L | 23513712 | 2L | 8244970..8245226 | 766..510 | 1285 | 100 | Minus |
| 2L | 23513712 | 2L | 8252594..8252777 | 207..24 | 920 | 100 | Minus |
| 2L | 23513712 | 2L | 8244589..8244734 | 910..765 | 730 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:23:47 has no hits.
BO26246.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-09 15:52:20 Download gff for
BO26246.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8086-RB | 116..1009 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:51 Download gff for
BO26246.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8086-RB | 116..1009 | 17..912 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:24:37 Download gff for
BO26246.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8086-RB | 116..1009 | 17..912 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:24:37 Download gff for
BO26246.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8252595..8252777 | 24..206 | 100 | | Minus |
| 2L | 8244586..8244732 | 767..912 | 98 | <- | Minus |
| 2L | 8244970..8245223 | 513..766 | 100 | <- | Minus |
| 2L | 8252228..8252533 | 207..512 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:51 Download gff for
BO26246.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8244586..8244732 | 767..912 | 98 | <- | Minus |
| arm_2L | 8244970..8245223 | 513..766 | 100 | <- | Minus |
| arm_2L | 8252228..8252533 | 207..512 | 100 | <- | Minus |
| arm_2L | 8252595..8252777 | 24..206 | 100 | | Minus |
BO26246.pep Sequence
Translation from 16 to 928
> BO26246.pep
MNKVEFKNKNKDQGPCARVRKIRPINMGGNVEQRPWTPTVRIGKIAAETT
NPGPATVQLPTLIGSKVPDSKKKAAPSYSFGHKLGGKYDTSGPGPAQYNV
TGMRAKGRDYPRAATLQSRPKELTRFSNPGPGEYDVVPAAKAVIDATPKY
TFGQRPVALKTFQIPAPNVYKIPTVMGSSKEGKIRSAPAYTITGREKPPL
IPVMIFPGPGYYDGEYTVVKPKPPVFSMRGKYKMGSEDSKPGPGAHCPEK
YWEKRSPPAISFGILHSPYIKKPLPVNVPQRCVRSLLENRADKPYDNIAS
FLDH
BO26246.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:42:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8086-PB | 298 | CG8086-PB | 1..298 | 1..298 | 1605 | 100 | Plus |
| CG8086-PA | 272 | CG8086-PA | 1..272 | 27..298 | 1465 | 100 | Plus |
| CG8086-PK | 261 | CG8086-PK | 1..243 | 27..270 | 1231 | 95.5 | Plus |
| CG8086-PI | 1603 | CG8086-PI | 1..258 | 1..266 | 963 | 73 | Plus |
| CG8086-PO | 1516 | CG8086-PO | 1..255 | 1..264 | 954 | 75.8 | Plus |
| CG8086-PI | 1603 | CG8086-PI | 283..467 | 76..279 | 190 | 29.9 | Plus |
| CG8086-PI | 1603 | CG8086-PI | 208..432 | 66..275 | 185 | 25.5 | Plus |
| CG8086-PI | 1603 | CG8086-PI | 349..564 | 76..275 | 183 | 29.2 | Plus |
| CG8086-PI | 1603 | CG8086-PI | 712..877 | 76..257 | 181 | 29.7 | Plus |
| CG8086-PI | 1603 | CG8086-PI | 619..828 | 43..275 | 165 | 28.2 | Plus |
| CG8086-PI | 1603 | CG8086-PI | 745..927 | 76..275 | 164 | 29 | Plus |
| CG8086-PI | 1603 | CG8086-PI | 943..1125 | 76..275 | 159 | 28 | Plus |
| CG8086-PI | 1603 | CG8086-PI | 520..729 | 43..275 | 157 | 27.8 | Plus |
