BO26336.complete Sequence
460 bp assembled on 2010-07-01
GenBank Submission: KX799972
> BO26336.complete
GAAGTTATCAGTCGACATGTCCGAGCTAGGTGGAAATGATTTCCTGGAGG
CCACCGCGGCCTGGTGCACCCGGAATCCGCACGTTGCTATCTGCCTGCTA
GCTGGTGGTCTTGTATTCATGCTGCCCTTCCTTATAATATTTGGGTTTGG
AATAGCCACCATGGTTATGACCTTTACAGGTTTGCTGGTGCTAGAAGGCA
CACTCCTGACCATTGTGTCCATGGTGTTCTTCGCCTGCCTGGGAGGACTA
GTCATAATGGTACCTCTCTTCGGTGTCGCCGCTGTTGCTGCCTATTTCGG
ATTTGCCCAGGTGTATGGCCTATGTGATGGAATAGAGATCCATAAGAGCG
CGTGGGTCATGTTCTTTAGGGATCAACGGAAGGCCGGCGATCCGCCGCCA
GCTGCTGTGACCATAACCGATGAACCCACTTCTACGACTGCAGCAAGCTT
TCTAGACCAT
BO26336.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:03:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32803-RB | 429 | CG32803-PB | 1..426 | 17..442 | 2130 | 100 | Plus |
| CG32803-RA | 642 | CG32803-PA | 214..639 | 17..442 | 2130 | 100 | Plus |
| CG32803-RC | 729 | CG32803-PC | 301..726 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:03:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32803-RB | 790 | CG32803-RB | 289..714 | 17..442 | 2130 | 100 | Plus |
| CG32803-RA | 818 | CG32803-RA | 323..748 | 17..442 | 2130 | 100 | Plus |
| CG32803-RC | 905 | CG32803-RC | 410..835 | 17..442 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:03:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1900769..1901015 | 442..196 | 1235 | 100 | Minus |
| X | 23542271 | X | 1901064..1901245 | 198..17 | 910 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:03:26 has no hits.
BO26336.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:04:10 Download gff for
BO26336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32803-RA | 350..775 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:09:33 Download gff for
BO26336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32803-RC | 410..835 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:44 Download gff for
BO26336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32803-RC | 410..835 | 17..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:44 Download gff for
BO26336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1900767..1901013 | 198..444 | 99 | <- | Minus |
| X | 1901065..1901245 | 17..197 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:09:33 Download gff for
BO26336.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1795098..1795278 | 17..197 | 100 | | Minus |
| arm_X | 1794800..1795046 | 198..444 | 99 | <- | Minus |
BO26336.pep Sequence
Translation from 16 to 460
> BO26336.pep
MSELGGNDFLEATAAWCTRNPHVAICLLAGGLVFMLPFLIIFGFGIATMV
MTFTGLLVLEGTLLTIVSMVFFACLGGLVIMVPLFGVAAVAAYFGFAQVY
GLCDGIEIHKSAWVMFFRDQRKAGDPPPAAVTITDEPTSTTAASFLDH
BO26336.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:25:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32803-PB | 142 | CG32803-PB | 1..142 | 1..142 | 738 | 100 | Plus |
| CG32803-PA | 213 | CG32803-PA | 72..213 | 1..142 | 738 | 100 | Plus |
| CG32803-PC | 242 | CG32803-PC | 101..242 | 1..142 | 738 | 100 | Plus |
| CG32803-PD | 207 | CG32803-PD | 72..207 | 1..142 | 694 | 95.8 | Plus |
