BO26342.complete Sequence
1165 bp assembled on 2010-07-01
GenBank Submission: KX798073
> BO26342.complete
GAAGTTATCAGTCGACATGTTGACTGGTTCAGGGCATTGCCAAGTGGGAT
ACGTGCGGCACCTGTCGGAGCTGCGGATAAGGGAACTTGAAAAATTGTCG
GTTCGTATACAGGGCTCCATCAACACCGAAAAGTATGCCTGCGAGAGCTA
TTTCGACTACGTCTGTAGCCGCAATCGACCCCTCTTTTCGATCATGGGAC
ACATGCCGCAAATGGGCGATCTTATGCAGTTGCTGACCGAGCTGCAGAAC
GATCCAGAGCCATTCGAGGCTAAGCAGAAGACGCTGGACTTCTTCATCTC
CTGCAACGTGCACCACGCGCTGGAAGACTGCTATCGTGAGACCTATGAGT
ATTTCAAGCCACTTTTCGGGTATATAGTTACAAAAAACATGCTCAATGGA
GAATCCCACGAGCTGGATGACTTTCTGGGCATTTTGGACCGCTTCGTCGT
CAGGTTTCAGAAGGACAGAGAGTCGAATCCCATTCTCAGCAAGCTGGCCA
CGTATAAGCAGAAATTTAAAACGCCGCGAGTCTACTTCCATGCTAGAGAC
CTGAGCCGGGAGTACAAGGACCTGCGGATCTACCGGGAGAGCTACGAACA
CAACGTTCGCAATCTGGAGCAGCACAGAAAACTGAATTCAACATACGAAT
TGGGGGTTCAGCGCACCATGCTGGATTGGAGCATGTACCTCTTTCAGAGC
CGCAACAAGCCCATGTCCTACTTCTACTCCACGTTTACGGTCCATTTGTA
CATGATGCTTTTTAATAGTCTGGAGCGTCAGCGTGATTTCACGCGGTTTC
GCGAAGATGTGGAGTGTTTAAGGCTGCCGCAGTTCGTTAATGTTCTGGAT
GAGGCCAGAATGCTGGCTGTGATCTACTTAAAGAGCTTCCGAGCGGCCTG
GATAGACTACAGCGCCTGGATCAACTCGCCTCCACAGAACAGTGGGATAT
ACGATCAGGAAAATGGCGTCCTTCAAAAGTACCATCTTGACAACAAGCGT
ATATTTTTTACTCTTTACGCTCAGAACTTCTGTGAGTTTGGGAAGGATCT
GGCCGAGCATGTCTTCTATCTGGGCCTTAAACAGAACAAGGACTTTTACG
ACATATACTCTTGTGGATTCCAAACGGAAAACCCTATGACTTGTGTTGCA
AGCTTTCTAGACCAT
BO26342.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1092-RD | 1185 | CG1092-PD | 52..1182 | 17..1147 | 5655 | 100 | Plus |
| CG1092-RC | 1185 | CG1092-PC | 52..1182 | 17..1147 | 5655 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1092-RD | 1310 | CG1092-RD | 74..1204 | 17..1147 | 5655 | 100 | Plus |
| CG1092-RC | 1492 | CG1092-RC | 256..1386 | 17..1147 | 5655 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4267260..4268210 | 197..1147 | 4755 | 100 | Plus |
| 3R | 32079331 | 3R | 4267025..4267206 | 17..198 | 910 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:00:06 has no hits.
BO26342.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:10 Download gff for
BO26342.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1092-RA | 77..1202 | 22..1149 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:52 Download gff for
BO26342.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1092-RC | 261..1386 | 22..1149 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:21 Download gff for
BO26342.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1092-RC | 261..1386 | 22..1149 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:21 Download gff for
BO26342.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4267030..4267205 | 22..197 | 100 | -> | Plus |
| 3R | 4267261..4268210 | 198..1149 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:52 Download gff for
BO26342.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 92752..92927 | 22..197 | 100 | -> | Plus |
| arm_3R | 92983..93932 | 198..1149 | 99 | | Plus |
BO26342.pep Sequence
Translation from 16 to 1165
> BO26342.pep
MLTGSGHCQVGYVRHLSELRIRELEKLSVRIQGSINTEKYACESYFDYVC
SRNRPLFSIMGHMPQMGDLMQLLTELQNDPEPFEAKQKTLDFFISCNVHH
ALEDCYRETYEYFKPLFGYIVTKNMLNGESHELDDFLGILDRFVVRFQKD
RESNPILSKLATYKQKFKTPRVYFHARDLSREYKDLRIYRESYEHNVRNL
EQHRKLNSTYELGVQRTMLDWSMYLFQSRNKPMSYFYSTFTVHLYMMLFN
SLERQRDFTRFREDVECLRLPQFVNVLDEARMLAVIYLKSFRAAWIDYSA
WINSPPQNSGIYDQENGVLQKYHLDNKRIFFTLYAQNFCEFGKDLAEHVF
YLGLKQNKDFYDIYSCGFQTENPMTCVASFLDH
BO26342.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1092-PD | 394 | CG1092-PD | 18..394 | 1..377 | 2024 | 100 | Plus |
| CG1092-PC | 394 | CG1092-PC | 18..394 | 1..377 | 2024 | 100 | Plus |
