Clone BO26356 Report

Search the DGRC for BO26356

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:263
Well:56
Vector:pDNR-Dual
Associated Gene/TranscriptCG7453-RA
Protein status:BO26356.pep: Imported from assembly
Sequenced Size:946

Clone Sequence Records

BO26356.complete Sequence

946 bp assembled on 2010-07-01

GenBank Submission: KX796510

> BO26356.complete
GAAGTTATCAGTCGACATGAAGCTGCTCTATATGCTGTGGCTGCTGAGCA
TCTTGGTCCTGGTCTCAGGCCAGCAGAAGCAGACAGCTAACTCCGCCACC
AAGGACGCCCCAGTGGTGGCCAATGCGACGAACGTGCTGCAGGCCAAAGT
TATTCCAGGATCGAAATTGGAATCTGGATCTCCGGGAGCTGCCAGCCAGC
TGGTGCCGGGTAAGGATGCAGCTGTGTTGCAACAGGACAAGAACTTAAAC
AAAACGGCCACAGCAGAAAATGCAGGTAAAGCCAAAAATCTCACAAACAC
CGATACAGGAGTGCCCACCATTCCTTTGGTCACTTCCAAGCCGGCTGTGG
AGCAAAAGGCGGCCAAGGAGGCGACCAATACGACCTCCACTACAACTTCT
TCCACCACGACCACCACCACCACGGCAAAGCCAGCTGCAGGATCAGCCAT
AGTCACCGAGGGCCAGTCCATGAAGGATGTCACCAAGCCGAGCAACTCGT
CCACCAACGGCGCGGCAATATCCCCGACCAACAGCACCCACACCGCCACA
GCCACCACCAAAACTGTCAATTCAACCATCATCGCAACCACGCCAAAGCC
GAAGAAGCCCCCAGTGGTATTGAGCACTGATATACACCAGGAGGGGGAGG
ATATGGCGGAGCTGGAAAAGAGTCAGGATAAGCCAGGTACAAAGGGCGCT
CCCACCCAGCCATTGGCCACACCACCAGAGCCATTGGTGCAGGGGCTTAC
TGGAAGTAATCTTGCCGATCACGGAGAGAACGGGTATGTGGTACCCATTG
TTACCGTGCTGCTGACCGTTCCGCTGGCCATCGGCGTGGTGACCATCATG
TACCGCCGCTTCCGCGACATGTGGAGCACCAGGCACTACCGTCGCATGGA
CTTCCTGGTGGACGGCATGTACAACGACGCAAGCTTTCTAGACCAT

BO26356.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:59:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG7453-RA 915 CG7453-PA 1..912 17..928 4560 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG7453-RA 1852 CG7453-RA 107..1018 17..928 4560 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 19180279..19181190 17..928 4560 100 Plus
Blast to na_te.dros performed on 2014-11-28 01:59:58 has no hits.

BO26356.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:08 Download gff for BO26356.complete
Subject Subject Range Query Range Percent Splice Strand
CG7453-RA 102..1013 17..930 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:48 Download gff for BO26356.complete
Subject Subject Range Query Range Percent Splice Strand
CG7453-RA 107..1018 17..930 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:16 Download gff for BO26356.complete
Subject Subject Range Query Range Percent Splice Strand
CG7453-RA 107..1018 17..930 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:16 Download gff for BO26356.complete
Subject Subject Range Query Range Percent Splice Strand
X 19180279..19181190 17..930 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:48 Download gff for BO26356.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 19074312..19075223 17..930 99   Plus

BO26356.pep Sequence

Translation from 16 to 946

> BO26356.pep
MKLLYMLWLLSILVLVSGQQKQTANSATKDAPVVANATNVLQAKVIPGSK
LESGSPGAASQLVPGKDAAVLQQDKNLNKTATAENAGKAKNLTNTDTGVP
TIPLVTSKPAVEQKAAKEATNTTSTTTSSTTTTTTTAKPAAGSAIVTEGQ
SMKDVTKPSNSSTNGAAISPTNSTHTATATTKTVNSTIIATTPKPKKPPV
VLSTDIHQEGEDMAELEKSQDKPGTKGAPTQPLATPPEPLVQGLTGSNLA
DHGENGYVVPIVTVLLTVPLAIGVVTIMYRRFRDMWSTRHYRRMDFLVDG
MYNDASFLDH

BO26356.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG7453-PA 304 CG7453-PA 1..304 1..304 1533 100 Plus
CG34220-PA 726 CG34220-PA 253..401 91..239 154 26.8 Plus
CG34220-PA 726 CG34220-PA 79..233 80..239 152 27 Plus