BO26358.complete Sequence
904 bp assembled on 2010-07-01
GenBank Submission: KX795775
> BO26358.complete
GAAGTTATCAGTCGACATGGGCTCCCGTTCACGTACACCCAGTCCGTCGG
GCAAGCGACGCCACCATAAGAGCAAGCACAAAAAACGCAGTAAGTCCCAC
CACGACCACGAGCGGCCCAGCACAAGAACGGATAGAGACAAGTCCTCGGA
GGTGAACAACCATGGACGACATCGCGAACGGGACAGGGACCGCGAGCGGG
ATAGACACCGCAGCGACCGACACACTGAGCGCGACTACCGTCACTCCCCC
TCGATCCTGAAATCCCGAAAACGCTCCAGCTCGTCGAGCAGCGACAGTCA
GTACTCCGAGCAGGAGTCGCAACGTAGCAAACAGAAGCGCAGCCGCTTTA
AGAAGCTGGATGAGCAAAACCAGATGCAGGTCGAACGCCTGGCCGAGATG
GAGCGGCAGCGTCGGGCGAAGGAGCTCGAGCAAAAGACAATCGAAGAGGA
AGCCGCCAAGCGCATAGAGATGCTGGTAAAAAAGCGCGTCGAGGAGGAGC
TAGAAAAGCGTCGCGACGAAATCGAACAGGAGGTCAATCGACGCGTTGAG
ACCGCCAAGGCTGAGATGGAGCGCGAAATGATGCTGGAGCTGGAGCGGCG
GCGAGAGCAGATACGCGAAGAAGAACGCCGGCGCGAGGAGGATGAAAAAC
AAAAACGCGAAGAGCTCGAAGAAATTTTGGCCGAAAACAATCGCAAAATC
GAAGAGGCGCAAAGAAAACTGGCCGAAGAACGGTTAGCAATAATCGAGGA
GCAGCGCCTTATGGACGAGGAGCGGCAACGCATGCGCAAGGAGCAGGAGA
AGCGCGTCAAGGAAGAGCAGAAGGTCATATTAGGCAAAAACAATTCCAGG
CCCAAGCTATCGTTCTCCCTGAAACCGGGCGCATTAGCAAGCTTTCTAGA
CCAT
BO26358.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31712-RA | 873 | CG31712-PA | 1..870 | 17..886 | 4350 | 100 | Plus |
| CG31712-RB | 855 | CG31712-PB | 1..622 | 17..638 | 3110 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31712-RA | 1491 | CG31712-RA | 129..999 | 16..886 | 4355 | 100 | Plus |
| CG31712-RB | 3159 | CG31712-RB | 129..751 | 16..638 | 3115 | 100 | Plus |
| CG31712-RB | 3159 | CG31712-RB | 2417..2667 | 636..886 | 1255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9937658..9938006 | 364..16 | 1745 | 100 | Minus |
| 2L | 23513712 | 2L | 9937237..9937512 | 638..363 | 1380 | 100 | Minus |
| 2L | 23513712 | 2L | 9935259..9935424 | 886..721 | 830 | 100 | Minus |
| 2L | 23513712 | 2L | 9935485..9935571 | 722..636 | 435 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:00:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GATE | 8507 | GATE DME010298 8507bp Derived from AJ010298 (e1315889) (Rel. 56, Last updated, Version 1). | 3512..3540 | 679..651 | 109 | 86.2 | Minus |
BO26358.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:09 Download gff for
BO26358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31712-RA | 138..1007 | 17..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:50 Download gff for
BO26358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31712-RA | 130..999 | 17..888 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:19 Download gff for
BO26358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31712-RA | 130..999 | 17..888 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:19 Download gff for
BO26358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9935256..9935423 | 722..888 | 98 | <- | Minus |
| 2L | 9935486..9935569 | 638..721 | 100 | <- | Minus |
| 2L | 9937238..9937510 | 365..637 | 100 | <- | Minus |
| 2L | 9937658..9938005 | 17..364 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:50 Download gff for
BO26358.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9935256..9935423 | 722..888 | 98 | <- | Minus |
| arm_2L | 9935486..9935569 | 638..721 | 100 | <- | Minus |
| arm_2L | 9937238..9937510 | 365..637 | 100 | <- | Minus |
| arm_2L | 9937658..9938005 | 17..364 | 100 | | Minus |
BO26358.pep Sequence
Translation from 16 to 904
> BO26358.pep
MGSRSRTPSPSGKRRHHKSKHKKRSKSHHDHERPSTRTDRDKSSEVNNHG
RHRERDRDRERDRHRSDRHTERDYRHSPSILKSRKRSSSSSSDSQYSEQE
SQRSKQKRSRFKKLDEQNQMQVERLAEMERQRRAKELEQKTIEEEAAKRI
EMLVKKRVEEELEKRRDEIEQEVNRRVETAKAEMEREMMLELERRREQIR
EEERRREEDEKQKREELEEILAENNRKIEEAQRKLAEERLAIIEEQRLMD
EERQRMRKEQEKRVKEEQKVILGKNNSRPKLSFSLKPGALASFLDH
BO26358.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31712-PA | 290 | CG31712-PA | 1..290 | 1..290 | 1453 | 100 | Plus |
| CG31712-PB | 284 | CG31712-PB | 1..207 | 1..207 | 1049 | 100 | Plus |
| CG2839-PA | 826 | CG2839-PA | 422..676 | 13..269 | 298 | 29.3 | Plus |
| CG2839-PA | 826 | CG2839-PA | 467..730 | 13..269 | 293 | 30 | Plus |
| CG2839-PA | 826 | CG2839-PA | 286..534 | 13..269 | 290 | 30.5 | Plus |
| CG2839-PA | 826 | CG2839-PA | 294..568 | 13..269 | 290 | 26.5 | Plus |
| CG2839-PA | 826 | CG2839-PA | 355..616 | 13..269 | 290 | 28.7 | Plus |
| CG2839-PA | 826 | CG2839-PA | 379..640 | 13..269 | 290 | 29.7 | Plus |
| CG2839-PA | 826 | CG2839-PA | 407..652 | 13..269 | 284 | 29.7 | Plus |
| CG2839-PA | 826 | CG2839-PA | 312..592 | 4..269 | 283 | 27.8 | Plus |
| CG2839-PA | 826 | CG2839-PA | 343..598 | 13..269 | 281 | 28 | Plus |
| CG2839-PA | 826 | CG2839-PA | 506..749 | 13..267 | 273 | 27.9 | Plus |
| CG2839-PA | 826 | CG2839-PA | 267..506 | 39..269 | 258 | 31 | Plus |
| rudhira-PE | 2075 | CG43154-PE | 1397..1666 | 13..279 | 239 | 23.4 | Plus |
| rudhira-PC | 2075 | CG43154-PC | 1397..1666 | 13..279 | 239 | 23.4 | Plus |
| CG2839-PA | 826 | CG2839-PA | 527..791 | 2..269 | 235 | 26.6 | Plus |
| rudhira-PE | 2075 | CG43154-PE | 1366..1623 | 18..269 | 225 | 28.1 | Plus |
| rudhira-PE | 2075 | CG43154-PE | 1336..1566 | 30..268 | 216 | 25.8 | Plus |
| CG2839-PA | 826 | CG2839-PA | 269..458 | 84..280 | 215 | 31 | Plus |
| rudhira-PE | 2075 | CG43154-PE | 1323..1568 | 39..286 | 193 | 22.1 | Plus |
| CG2839-PA | 826 | CG2839-PA | 266..402 | 131..269 | 192 | 40.6 | Plus |
| CG2839-PA | 826 | CG2839-PA | 263..429 | 106..269 | 190 | 35.7 | Plus |
