BO26394.complete Sequence
970 bp assembled on 2010-07-01
GenBank Submission: KX797544
> BO26394.complete
GAAGTTATCAGTCGACATGAACACACCAGTGATTTCGGTGGTGCCAAAGG
AATTCAGTCTCAGAAATCACCAATCCACCAACCCAGCCACCAGCATGAAG
TTCTTCGTTGCCACCGCCTGCATCCTGCTCCTGGCAGCAGGTATCTCTGC
CGATCCCGTCAAGGCCGCTGAGGAGCAGCCCGGCGCCTTTGCCCAGTGCC
TCGAGTCCGACTCCATCTCGTGCCTGCAGCTCACGCTCTTCCGCAAGGCC
AAGTCCGTGTTCGATAACCCTCAGATCGAGCTTTTCGGTGGTGTTTCTCT
GGTGAAGTCCAATGAAGGTCGTCAGGGCAAGTCCCTGGACAACTCCCTGG
CTGTTGAGGCCGCTCCCACCGTGGAGGCCCGCACCGCCGAGATGGGCAAC
TACTTCATGGACAACGCCAAGAGCTTCTTCGCTGAACGCTCCCTGAACTT
CAACTTCGCTAACGCCGCTCGCAGCGTGGCCCGCGCCATTCCCGATGACA
TCAAGGCTGATCTCCGCGAGCTGGTTGTTGAGTCCCGTACCCGCAAGAAG
AAGCTGCTGAAGAAGTTCCTGCCCATCCTGCTGGGAGTTGGTGCTAAGAT
CGCCGTCCTTGGAGTCGGCTCCATCTTCGGACTACTGTTCCTGGCCAAGA
AGGCACTGGTTGTGTCTGTTATCGCCTTCTTCCTGGCTCTGGCTGCTGGT
GCTTCCAGCGGACTGGGACGCATCGGTGGATCCGGAGGCGGCGGCGGTCT
GCTCGGCGGTCTGGGAGGTCTCTTCGGCGGCAAGAACGCCGGTGGATCGT
CGGCTGCCAGCACCGGTGGATGGTCCTCGGGTGGTGGTGCCTCCAGCGCC
GGATGGTCCTCTGGCGGCAGCTCGGGTTGGGACACCCATGGTGCCTACAG
CTCGCCTGTGGCCCAGACCATCGCCTACCAGGGATACAAGCAGGCCCGCC
GGGCAAGCTTTCTAGACCAT
BO26394.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:59:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi6-RB | 939 | CG1151-PB | 1..936 | 17..952 | 4680 | 100 | Plus |
| Osi6-RA | 939 | CG1151-PA | 1..936 | 17..952 | 4680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:59:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi6-RB | 1846 | CG1151-RB | 29..964 | 17..952 | 4680 | 100 | Plus |
| Osi6-RA | 1545 | CG1151-RA | 29..964 | 17..952 | 4680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6235582..6236299 | 235..952 | 3590 | 100 | Plus |
| 3R | 32079331 | 3R | 6234736..6234954 | 17..235 | 1095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:59:34 has no hits.
BO26394.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:03 Download gff for
BO26394.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi6-RA | 28..963 | 17..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:38 Download gff for
BO26394.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi6-RA | 29..964 | 17..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:04 Download gff for
BO26394.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi6-RA | 29..964 | 17..954 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:04 Download gff for
BO26394.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6234736..6234954 | 17..235 | 100 | -> | Plus |
| 3R | 6235583..6236299 | 236..954 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:38 Download gff for
BO26394.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2060458..2060676 | 17..235 | 100 | -> | Plus |
| arm_3R | 2061305..2062021 | 236..954 | 99 | | Plus |
BO26394.pep Sequence
Translation from 16 to 970
> BO26394.pep
MNTPVISVVPKEFSLRNHQSTNPATSMKFFVATACILLLAAGISADPVKA
AEEQPGAFAQCLESDSISCLQLTLFRKAKSVFDNPQIELFGGVSLVKSNE
GRQGKSLDNSLAVEAAPTVEARTAEMGNYFMDNAKSFFAERSLNFNFANA
ARSVARAIPDDIKADLRELVVESRTRKKKLLKKFLPILLGVGAKIAVLGV
GSIFGLLFLAKKALVVSVIAFFLALAAGASSGLGRIGGSGGGGGLLGGLG
GLFGGKNAGGSSAASTGGWSSGGGASSAGWSSGGSSGWDTHGAYSSPVAQ
TIAYQGYKQARRASFLDH
BO26394.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi6-PB | 312 | CG1151-PB | 1..312 | 1..312 | 1562 | 100 | Plus |
| Osi6-PA | 312 | CG1151-PA | 1..312 | 1..312 | 1562 | 100 | Plus |
| Osi14-PA | 268 | CG1155-PA | 1..254 | 27..306 | 206 | 29 | Plus |
| Osi12-PA | 295 | CG1154-PA | 59..272 | 63..313 | 175 | 28.8 | Plus |
| CG34327-PA | 220 | CG34327-PA | 64..122 | 226..293 | 163 | 54.4 | Plus |
