BO26402.complete Sequence
874 bp assembled on 2010-07-01
GenBank Submission: KX799355
> BO26402.complete
GAAGTTATCAGTCGACATGTCTGGAACATCGACCTCTGAACGCTCCAACT
CCGAAGACAGCCCGTTGAATCCCTGCCTAACGGAGGTCCTCAGGAATTGT
GCCAACATTCAGTCGCTGGAGAGCTTGAACTACGAATATAACGACGTTTT
GCTGACCGAAGACAACGTGGGGAAGATGATTACGCCGAATCCGTATTCCT
TTAGTGGCAACATTTCCATCAGCAGTTGTCCAAGTGAAGATGTATCATTT
TCGGAAAGCATCCTAGAGGACAACGGACGCATTTCGCTGGCCTATGAGAA
CCTGAAGACAATTCCGCGGCGACTGGCCGACAAATTCGCAGCGCAGACCA
AGTTTCTCGATTTGAGTCACAATGATTTCCGAAACTTGAGATTTCTCTCC
TTTTTCGAGGATCTGGACACTTTAATCCTGGACCGCAACGTAAACCTGGA
CATAAACACTTTTCCTTATTTGCCGAGCTTAAGGATCTTGTGGATCAACA
ATTGCGATATAGCAAATATAACCGATTGGATACACCGCATCGAACGGCAC
TGTCCTGCGCTGGATCAGCTCTCTTGCATGGGGAATCCTGGCATCCGCAC
AGTTTTCGGGGGCCAAGGACCCCGCGAGTATATACTACAGGTGCTTCCCC
AGCTAAAATATCTCGATGGACTTCCAACCAGCAGGAATGCAGCTTATGCG
ACGCTGTCTTCCTCACAAGGACAGGGTCCGGACTCCACGAGCAATTCGGA
AAAGCCTCCACTCGCATCCGCATTCACTTTCAAGGACATCATCCGTCCAA
AGTATTCCAGAAAATCGCACAGCGGACGGATGTTTGGCAACGGCTCCTCC
ACAAACGCAAGCTTTCTAGACCAT
BO26402.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31274-RB | 843 | CG31274-PB | 1..840 | 17..856 | 4200 | 100 | Plus |
MESK4-RB | 843 | CG31447-PB | 1..840 | 17..856 | 4200 | 100 | Plus |
MESK4-RA | 843 | CG31447-PA | 1..840 | 17..856 | 4200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31274-RB | 1399 | CG31274-RB | 122..961 | 17..856 | 4200 | 100 | Plus |
MESK4-RB | 1488 | CG31447-RB | 112..951 | 17..856 | 4200 | 100 | Plus |
MESK4-RA | 1390 | CG31447-RA | 112..951 | 17..856 | 4200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16989020..16989455 | 58..493 | 2180 | 100 | Plus |
3R | 32079331 | 3R | 16993232..16993667 | 58..493 | 2180 | 100 | Plus |
3R | 32079331 | 3R | 16989518..16989882 | 492..856 | 1825 | 100 | Plus |
3R | 32079331 | 3R | 16993730..16994094 | 492..856 | 1825 | 100 | Plus |
3R | 32079331 | 3R | 16988925..16988968 | 17..60 | 220 | 100 | Plus |
3R | 32079331 | 3R | 16993137..16993180 | 17..60 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:00:16 has no hits.
BO26402.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:12 Download gff for
BO26402.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31274-RB | 1..840 | 17..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:57 Download gff for
BO26402.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MESK4-RA | 112..951 | 17..858 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:23 Download gff for
BO26402.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MESK4-RA | 112..951 | 17..858 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:23 Download gff for
BO26402.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16988925..16988968 | 17..60 | 100 | -> | Plus |
3R | 16989023..16989454 | 61..492 | 100 | -> | Plus |
3R | 16989519..16989882 | 493..858 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:57 Download gff for
BO26402.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12814647..12814690 | 17..60 | 100 | -> | Plus |
arm_3R | 12814745..12815176 | 61..492 | 100 | -> | Plus |
arm_3R | 12815241..12815604 | 493..858 | 99 | | Plus |
BO26402.pep Sequence
Translation from 16 to 874
> BO26402.pep
MSGTSTSERSNSEDSPLNPCLTEVLRNCANIQSLESLNYEYNDVLLTEDN
VGKMITPNPYSFSGNISISSCPSEDVSFSESILEDNGRISLAYENLKTIP
RRLADKFAAQTKFLDLSHNDFRNLRFLSFFEDLDTLILDRNVNLDINTFP
YLPSLRILWINNCDIANITDWIHRIERHCPALDQLSCMGNPGIRTVFGGQ
GPREYILQVLPQLKYLDGLPTSRNAAYATLSSSQGQGPDSTSNSEKPPLA
SAFTFKDIIRPKYSRKSHSGRMFGNGSSTNASFLDH
BO26402.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31274-PB | 280 | CG31274-PB | 1..280 | 1..280 | 1466 | 100 | Plus |
MESK4-PB | 280 | CG31447-PB | 1..280 | 1..280 | 1466 | 100 | Plus |
MESK4-PA | 280 | CG31447-PA | 1..280 | 1..280 | 1466 | 100 | Plus |
CG31076-PB | 182 | CG31076-PB | 7..153 | 85..217 | 162 | 32.4 | Plus |