BO26429.complete Sequence
586 bp assembled on 2010-07-01
GenBank Submission: KX796026
> BO26429.complete
GAAGTTATCAGTCGACATGGGCTTCCTCACAGTATTAAAAAAGATGCGAC
AGAAGGAAAGGGAAATGCGCATATTACTGCTAGGTCTGGATAATGCCGGC
AAGACGACAATCCTGAAGCGCTTTAATGGCGAACCCATAGACACCATCTC
ACCCACACTGGGATTCAATATTAAAACCTTGGAGCACAACGGCTACACCC
TGAATATGTGGGATGTCGGTGGCCAGAAGTCTCTGCGATCCTACTGGAGA
AACTACTTCGAGTCCACTGATGGTCTGGTCTGGGTGGTGGATAGCGCTGA
CAGGATGCGCCTAGAGTCCTGCGGCCAGGAGCTGCAAGTTCTGCTCCAGG
AAGAGCGATTAGCTGGAGCCACACTCCTAGTTCTCTGCAACAAACAGGAT
CTACCGGGAGCCCTCTCATCCAACGAAATTAAAGAGATACTACACCTAGA
GGATATCACCACACATCATTGGCTGGTGGCCGGAGTTAGTGCAGTGACTG
GCGAGAAACTGCTTAGCTCCATGGACTGGTTGATCGCCGATATAGCTAAG
CGTATATTCACTTTGGATGCAAGCTTTCTAGACCAT
BO26429.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:58:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arl2-RA | 555 | CG7435-PA | 1..552 | 17..568 | 2760 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:58:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arl2-RA | 656 | CG7435-RA | 79..631 | 16..568 | 2765 | 100 | Plus |
| CG9601-RA | 1856 | CG9601-RA | 1670..1803 | 568..435 | 670 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:58:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8341303..8341657 | 82..436 | 1775 | 100 | Plus |
| 3R | 32079331 | 3R | 8341714..8341847 | 435..568 | 670 | 100 | Plus |
| 3R | 32079331 | 3R | 8341178..8341243 | 16..81 | 330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:58:52 has no hits.
BO26429.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:02:51 Download gff for
BO26429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arf84F-RA | 80..631 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:18 Download gff for
BO26429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arl2-RA | 80..631 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:45 Download gff for
BO26429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Arl2-RA | 80..631 | 17..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:45 Download gff for
BO26429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8341716..8341847 | 437..570 | 98 | | Plus |
| 3R | 8341303..8341657 | 82..436 | 100 | -> | Plus |
| 3R | 8341179..8341243 | 17..81 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:18 Download gff for
BO26429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4166901..4166965 | 17..81 | 100 | -> | Plus |
| arm_3R | 4167025..4167379 | 82..436 | 100 | -> | Plus |
| arm_3R | 4167438..4167569 | 437..570 | 98 | | Plus |
BO26429.pep Sequence
Translation from 16 to 586
> BO26429.pep
MGFLTVLKKMRQKEREMRILLLGLDNAGKTTILKRFNGEPIDTISPTLGF
NIKTLEHNGYTLNMWDVGGQKSLRSYWRNYFESTDGLVWVVDSADRMRLE
SCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEILHLEDITTH
HWLVAGVSAVTGEKLLSSMDWLIADIAKRIFTLDASFLDH
BO26429.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:20:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Arl2-PA | 184 | CG7435-PA | 1..184 | 1..184 | 950 | 100 | Plus |
| dnd-PA | 179 | CG6560-PA | 1..179 | 1..178 | 440 | 46.9 | Plus |
| Arf102F-PB | 180 | CG11027-PB | 15..180 | 14..179 | 410 | 45.8 | Plus |
| Arf102F-PA | 180 | CG11027-PA | 15..180 | 14..179 | 410 | 45.8 | Plus |
| Arf79F-PJ | 182 | CG8385-PJ | 15..173 | 14..172 | 383 | 44.7 | Plus |
