BO26433.complete Sequence
1045 bp assembled on 2010-07-01
GenBank Submission: KX796303
> BO26433.complete
GAAGTTATCAGTCGACATGTCGGTTAATACGGCTCACGCCAACAATGGCG
TGCTCATCCATGCTGGAGAGTACATACTGCTCCACAGCGACAGTGTCTCC
ATGGAGTTCTCCGGTCAGGACAATCCCATCTTCAAGGGCTCCAAAGGTGG
CAGGATTTATCTCACCTCCCACCGAATGATCTTCAATAGCAAGAAGTCCT
CGGATTCGATGCAGTCGTTCAGTGCCCCGTTTGTTGCTCTTTCGGATGTG
GAAATCGAACAGCCCGTTTTCGGGGCCAACTACATCAAGGGAAAGGTTCG
CGCTCAGCCAAATGGAAACTACGTGGGCGAGGTCAAGTTCAAGCTCCATT
TCAAGGCAGGCGGCGCAATTGAATACGGTCAAGCTCTACTGCGCTCCGCC
AAGACGGCGATGAACAACTACCACCGCGGTGGTCTGGCTGGTGATGATCC
GCCACCATATCAGCCGGCTGGATCCTGGAATGAGGCACCACCACCGGCAT
ATCAGCCACCACCTGGCTACTATGGCTGGCTGCCGCAACATGACGCCTTC
AGCGGCCCTGCGCCGAATACGGTCTATATGAGCGACAATCCGCCGCCGTA
TCCGGGTATCGCACCACCTGCTCACCAACCAGCACCGCAACAGCCGCAGG
CACCGTCGTCGAATGAACCCAATTGGTATGGTTTTTCAGCGCCGCCGCCG
CAGCAGCAACAACAGCAGCCGGGCTATGGGCCACAAGGATGGGCCGGTGG
CTATGTCCAACCTCCGCCGTACGCTTCATGTGCGCCAAATTGTCCACCAC
AGCCGCCGTACGCCGCTCCGGCTCAGACGTACAATGGCCCACAGCCATAT
GGTGGATACGGCAATGTTCCTGGCGGATTTAATACCCCCGGATTTCAGCA
ACCGAATGGAAATCCAAATGGCTATCCAGGTGGACCACCACCACCCGGAC
AACAAGCAGCAGGAGCAGCTGGAGGAGCCGCCGCATCTGGAGCCAGCTTT
ATGGGCTTCAGCTTGCCCCCTGGAATGGCAAGCTTTCTAGACCAT
BO26433.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:58:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Wbp2-RC | 1014 | CG11009-PC | 1..1011 | 17..1027 | 4950 | 99.3 | Plus |
Wbp2-RB | 1014 | CG11009-PB | 1..1011 | 17..1027 | 4950 | 99.3 | Plus |
Wbp2-RG | 1029 | CG11009-PG | 1..1009 | 17..1025 | 4940 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:58:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Wbp2-RC | 1751 | CG11009-RC | 109..1122 | 14..1027 | 4965 | 99.3 | Plus |
Wbp2-RB | 1758 | CG11009-RB | 109..1122 | 14..1027 | 4965 | 99.3 | Plus |
Wbp2-RG | 1369 | CG11009-RG | 109..1120 | 14..1025 | 4955 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:58:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 12851308..12851722 | 611..1025 | 2030 | 99.3 | Plus |
3L | 28110227 | 3L | 12850498..12850797 | 73..372 | 1500 | 100 | Plus |
3L | 28110227 | 3L | 12850915..12851153 | 373..611 | 1135 | 98.3 | Plus |
3L | 28110227 | 3L | 12850273..12850331 | 14..72 | 295 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 01:58:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 136..192 | 686..739 | 116 | 72.4 | Plus |
TART-B | 10654 | TART-B DM14101 10654bp Derived from U14101 (g603662) (Rel. 42, Last updated, Version 1). | 9166..9222 | 686..739 | 116 | 72.4 | Plus |
roo | 9092 | roo DM_ROO 9092bp | 1031..1090 | 661..721 | 113 | 67.2 | Plus |
BO26433.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:02:50 Download gff for
BO26433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11009-RC | 117..1127 | 17..1029 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:16 Download gff for
BO26433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Wbp2-RB | 117..1127 | 17..1029 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:44 Download gff for
BO26433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Wbp2-RB | 112..1122 | 17..1029 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:44 Download gff for
BO26433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 12850276..12850331 | 17..72 | 100 | -> | Plus |
3L | 12850498..12850797 | 73..372 | 100 | -> | Plus |
3L | 12850915..12851153 | 373..611 | 98 | -> | Plus |
3L | 12851309..12851723 | 612..1029 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:16 Download gff for
BO26433.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 12843598..12843897 | 73..372 | 100 | -> | Plus |
arm_3L | 12844015..12844253 | 373..611 | 98 | -> | Plus |
arm_3L | 12843376..12843431 | 17..72 | 100 | -> | Plus |
arm_3L | 12844409..12844823 | 612..1029 | 98 | | Plus |
BO26433.pep Sequence
Translation from 16 to 1045
> BO26433.pep
MSVNTAHANNGVLIHAGEYILLHSDSVSMEFSGQDNPIFKGSKGGRIYLT
SHRMIFNSKKSSDSMQSFSAPFVALSDVEIEQPVFGANYIKGKVRAQPNG
NYVGEVKFKLHFKAGGAIEYGQALLRSAKTAMNNYHRGGLAGDDPPPYQP
AGSWNEAPPPAYQPPPGYYGWLPQHDAFSGPAPNTVYMSDNPPPYPGIAP
PAHQPAPQQPQAPSSNEPNWYGFSAPPPQQQQQQPGYGPQGWAGGYVQPP
PYASCAPNCPPQPPYAAPAQTYNGPQPYGGYGNVPGGFNTPGFQQPNGNP
NGYPGGPPPPGQQAAGAAGGAAASGASFMGFSLPPGMASFLDH
BO26433.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:20:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Wbp2-PC | 337 | CG11009-PC | 1..337 | 1..337 | 1888 | 100 | Plus |
Wbp2-PB | 337 | CG11009-PB | 1..337 | 1..337 | 1888 | 100 | Plus |
Wbp2-PG | 342 | CG11009-PG | 1..336 | 1..336 | 1883 | 100 | Plus |
Wbp2-PE | 384 | CG11009-PE | 1..336 | 1..336 | 1883 | 100 | Plus |
Wbp2-PF | 199 | CG11009-PF | 1..198 | 1..198 | 1075 | 100 | Plus |