BO26434.complete Sequence
1072 bp assembled on 2010-07-01
GenBank Submission: KX794789
> BO26434.complete
GAAGTTATCAGTCGACATGCGACTGCCATATCGAAATAAGAAGGTCACCC
TGTGGGTGCTCTTCGGCATCATCGTCATCACCATGTTCCTATTCAAATTC
ACCGAACTGCGGCCCACATGCCTCTTCAAGGTGGACGCCGCCAACGAGCT
CTCCTCCCAAATGGTTCGCGTTGAGAAATACCTCACAGATGACAATCAAC
GCGTTTATTCATACAACCGTGAGATGCCATTAATATTCATAGGCGGCGTG
CCGAGATCTGGGACGACTTTGATGCGCGCCATGCTGGATGCCCATCCCGA
TGTGCGCTGCGGGCAGGAAACCCGTGTCATTCCGCGCATCCTGCAGCTGC
GCTCGCACTGGCTGAAGTCCGAGAAGGAGTCGCTCCGCCTGCAGGAGGCC
GGCATCACCAAAGAGGTCATGAACAGTGCCATCGCGCAGTTCTGTCTGGA
AATCATCGCCAAACACGGCGAGCCGGCGCCGCGCTTATGCAACAAGGATC
CGCTGACGCTGAAAATGGGCTCCTATGTCATCGAGCTATTTCCGAACGCT
AAATTCCTATTCATGGTGCGCGACGGCCGGGCGACAGTTCATTCGATTAT
ATCGCGCAAGGTGACAATCACCGGCTTCGATTTGAGCAGCTACCGGCAGT
GCATGCAGAAGTGGAACCACGCCATCGAGGTGATGCACGAGCAGTGCCGG
GACATCGGCAAGGACCGCTGCATGATGGTTTACTATGAGCAGCTGGTACT
GCATCCCGAGGAGTGGATGCGAAAGATACTGAAATTCCTGGACGTGCCAT
GGAACGATGCGGTGCTGCACCACGAGGAGTTCATAAATAAACCGAACGGT
GTGCCTCTGTCCAAGGTGGAACGTTCGTCGGACCAGGTTATCAAGCCGGT
TAATCTGGAGGCGATGTCCAAATGGGTTGGCCAAATACCCGGCGACGTGG
TGCGCGACATGGCCGACATAGCGCCCATGCTGTCCGTGCTCGGCTACGAT
CCGTACGCGAATCCGCCGGACTATGTTAAAGGCCAATCGAATGCTGTGGG
AGAGGCAAGCTTTCTAGACCAT
BO26434.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:59:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango13-RG | 1041 | CG32632-PG | 1..1038 | 17..1054 | 5190 | 100 | Plus |
| Tango13-RD | 1041 | CG32632-PD | 1..1038 | 17..1054 | 5190 | 100 | Plus |
| Tango13-RC | 1041 | CG32632-PC | 1..1038 | 17..1054 | 5190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:59:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango13-RG | 4728 | CG32632-RG | 1881..2918 | 17..1054 | 5190 | 100 | Plus |
| Tango13-RD | 4534 | CG32632-RD | 1687..2724 | 17..1054 | 5190 | 100 | Plus |
| Tango13-RC | 3344 | CG32632-RC | 1687..2724 | 17..1054 | 5190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:59:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13584156..13584398 | 306..548 | 1215 | 100 | Plus |
| X | 23542271 | X | 13584861..13585042 | 548..729 | 910 | 100 | Plus |
| X | 23542271 | X | 13585894..13586058 | 865..1029 | 810 | 99.4 | Plus |
| X | 23542271 | X | 13577506..13577664 | 17..175 | 795 | 100 | Plus |
| X | 23542271 | X | 13585690..13585828 | 727..865 | 695 | 100 | Plus |
| X | 23542271 | X | 13580048..13580185 | 169..306 | 675 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 01:59:01 has no hits.
BO26434.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:02:53 Download gff for
BO26434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango13-RC | 1686..2723 | 17..1056 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:22 Download gff for
BO26434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango13-RC | 1687..2724 | 17..1056 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:49 Download gff for
BO26434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tango13-RC | 1687..2724 | 17..1056 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:49 Download gff for
BO26434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13577506..13577664 | 17..175 | 100 | -> | Plus |
| X | 13580055..13580185 | 176..306 | 100 | -> | Plus |
| X | 13584157..13584397 | 307..547 | 100 | -> | Plus |
| X | 13584861..13585040 | 548..727 | 100 | -> | Plus |
| X | 13585691..13585827 | 728..864 | 100 | -> | Plus |
| X | 13585894..13586054 | 865..1025 | 100 | -> | Plus |
| X | 13589922..13589950 | 1026..1056 | 93 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:22 Download gff for
BO26434.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13471539..13471697 | 17..175 | 100 | -> | Plus |
| arm_X | 13474088..13474218 | 176..306 | 100 | -> | Plus |
| arm_X | 13478190..13478430 | 307..547 | 100 | -> | Plus |
| arm_X | 13478894..13479073 | 548..727 | 100 | -> | Plus |
| arm_X | 13479724..13479860 | 728..864 | 100 | -> | Plus |
| arm_X | 13479927..13480087 | 865..1025 | 100 | -> | Plus |
| arm_X | 13483955..13483983 | 1026..1056 | 93 | | Plus |
BO26434.pep Sequence
Translation from 16 to 1072
> BO26434.pep
MRLPYRNKKVTLWVLFGIIVITMFLFKFTELRPTCLFKVDAANELSSQMV
RVEKYLTDDNQRVYSYNREMPLIFIGGVPRSGTTLMRAMLDAHPDVRCGQ
ETRVIPRILQLRSHWLKSEKESLRLQEAGITKEVMNSAIAQFCLEIIAKH
GEPAPRLCNKDPLTLKMGSYVIELFPNAKFLFMVRDGRATVHSIISRKVT
ITGFDLSSYRQCMQKWNHAIEVMHEQCRDIGKDRCMMVYYEQLVLHPEEW
MRKILKFLDVPWNDAVLHHEEFINKPNGVPLSKVERSSDQVIKPVNLEAM
SKWVGQIPGDVVRDMADIAPMLSVLGYDPYANPPDYVKGQSNAVGEASFL
DH
BO26434.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:20:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tango13-PG | 346 | CG32632-PG | 1..346 | 1..346 | 1824 | 100 | Plus |
| Tango13-PD | 346 | CG32632-PD | 1..346 | 1..346 | 1824 | 100 | Plus |
| Tango13-PC | 346 | CG32632-PC | 1..346 | 1..346 | 1824 | 100 | Plus |
| Tango13-PE | 499 | CG32632-PE | 1..338 | 1..338 | 1777 | 99.7 | Plus |
| Tango13-PB | 499 | CG32632-PB | 1..338 | 1..338 | 1777 | 99.7 | Plus |
