BO26450.complete Sequence
1075 bp assembled on 2010-07-01
GenBank Submission: KX798908
> BO26450.complete
GAAGTTATCAGTCGACATGTCGGTAACATCTTCGATTGAGAAGCCAACAA
CCACAGCAAGTGCAATTCAGCAACAGTATCAGCATCAGCAGCAGCAACAG
CAACAGAAGCCACAACAGCAGCAACAGCAGGATAAAAGCAGCACCATCGC
AATCGCAGCAGCAGCAGGACAGCAACAAAAGCGCAAATCCCTGAGTTCCA
AGCGCTCGTATTCGCTATCCTCGTCGAGCGCCTCCAGTTCTGGTTCCTTT
GGGGCGATAAGGTCTGCGACATCGCCACTGGTCACCACCGCCGAGAGGGA
GAAAGATAAGGAGAAGAGCTCCTCCTCGGCCAGCAATAGCCACCATCAAC
ATCATCAGCTTCATCAACACCAACATCATCATCAGCAGCAGCAGTCGCAG
CAGCAGCAGCAATCCTTTTTGCCGTACTCATATTGCACCGATACCATAGC
AGCAGTACATCATCAACGACAGTCGTACGCGCTGGTCCAGAAGCCCCCAT
CGTTGCGCTACCAGGGAAAGCCCCATCATCAGCTGAGCAACTTCTCGCCC
ACGATGACCTCCTCGGAACCCTCATCCCCATTGGCCGCCGATGGTTGCGG
ATCCGGAATCCTTAGCCCATCGGAGGTCGCCACCCATTGTTGCGCCAATG
TCAAGGCCAATATCACCACCCCATTGGCCACCACCACACAGAAAATGCAC
CGAACAATACCATCTGATAAAATTAACCTACGCCTCATTCTTGTTAGTGG
TAAAACAAAAGAGTTTATTTTTAGCCCTTCAGATTCCGCAGGTGATATTG
CACAAACAGTATTTGATAATTGGCCAGAAGATTGGACCCACGAAACTGTG
TCGAAAGCCGAAATCTTGCGCTTAATTTATCAAGGTCGTTTTCTTCATTG
CAATGTAACCTTAGGAGCACTGGGACTTCCATTAGGCAAAACGACTGTTA
TGCATTTAGTGCCACGTGATAATTTGCCAGAGCCCAATTCACAAGATCAA
AGACAAAATAGTAAAGGCGGTTCTGGACGATGCTGTTCGACAAATTGCTC
TATTTTGGCAAGCTTTCTAGACCAT
BO26450.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 01:58:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| UBL3-RC | 1044 | CG9038-PC | 1..1041 | 17..1057 | 5205 | 100 | Plus |
| UBL3-RB | 1044 | CG9038-PB | 1..1041 | 17..1057 | 5205 | 100 | Plus |
| UBL3-RA | 1044 | CG9038-PA | 1..1041 | 17..1057 | 5205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 01:58:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| UBL3-RC | 2160 | CG9038-RC | 479..1524 | 12..1057 | 5215 | 99.9 | Plus |
| UBL3-RB | 1677 | CG9038-RB | 580..1625 | 12..1057 | 5215 | 99.9 | Plus |
| UBL3-RA | 2250 | CG9038-RA | 569..1614 | 12..1057 | 5215 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 01:58:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15851585..15852294 | 721..12 | 3535 | 99.9 | Minus |
| X | 23542271 | X | 15850546..15850712 | 995..829 | 835 | 100 | Minus |
| X | 23542271 | X | 15851088..15851196 | 830..722 | 545 | 100 | Minus |
| X | 23542271 | X | 15850367..15850430 | 1057..994 | 320 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 01:58:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2487..2873 | 45..412 | 159 | 54.8 | Plus |
BO26450.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:02:43 Download gff for
BO26450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| UBL3-RB | 566..1606 | 17..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:07:07 Download gff for
BO26450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| UBL3-RA | 574..1614 | 17..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:35 Download gff for
BO26450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| UBL3-RA | 574..1614 | 17..1059 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:35 Download gff for
BO26450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15850365..15850428 | 996..1059 | 96 | <- | Minus |
| X | 15850546..15850710 | 831..995 | 100 | <- | Minus |
| X | 15851088..15851196 | 722..830 | 100 | <- | Minus |
| X | 15851585..15852289 | 17..721 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:07:07 Download gff for
BO26450.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15744398..15744461 | 996..1059 | 96 | <- | Minus |
| arm_X | 15744579..15744743 | 831..995 | 100 | <- | Minus |
| arm_X | 15745121..15745229 | 722..830 | 100 | <- | Minus |
| arm_X | 15745618..15746322 | 17..721 | 100 | | Minus |
BO26450.pep Sequence
Translation from 16 to 1075
> BO26450.pep
MSVTSSIEKPTTTASAIQQQYQHQQQQQQQKPQQQQQQDKSSTIAIAAAA
GQQQKRKSLSSKRSYSLSSSSASSSGSFGAIRSATSPLVTTAEREKDKEK
SSSSASNSHHQHHQLHQHQHHHQQQQSQQQQQSFLPYSYCTDTIAAVHHQ
RQSYALVQKPPSLRYQGKPHHQLSNFSPTMTSSEPSSPLAADGCGSGILS
PSEVATHCCANVKANITTPLATTTQKMHRTIPSDKINLRLILVSGKTKEF
IFSPSDSAGDIAQTVFDNWPEDWTHETVSKAEILRLIYQGRFLHCNVTLG
ALGLPLGKTTVMHLVPRDNLPEPNSQDQRQNSKGGSGRCCSTNCSILASF
LDH
BO26450.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:20:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| UBL3-PC | 347 | CG9038-PC | 1..347 | 1..347 | 1804 | 100 | Plus |
| UBL3-PB | 347 | CG9038-PB | 1..347 | 1..347 | 1804 | 100 | Plus |
| UBL3-PA | 347 | CG9038-PA | 1..347 | 1..347 | 1804 | 100 | Plus |
| org-1-PB | 699 | CG11202-PB | 397..608 | 2..221 | 175 | 29.9 | Plus |
| org-1-PA | 699 | CG11202-PA | 397..608 | 2..221 | 175 | 29.9 | Plus |
